Detailed information    

insolico Bioinformatically predicted

Overview

Name   recU   Type   Machinery gene
Locus tag   QEP67_RS20085 Genome accession   NZ_CP123058
Coordinates   3880950..3881552 (+) Length   200 a.a.
NCBI ID   WP_000155596.1    Uniprot ID   A0A2A8DKZ6
Organism   Bacillus cereus group sp. MS39     
Function   plasmid transformation; homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3875950..3886552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP67_RS20040 (QEP67_19970) gpsB 3876090..3876428 (-) 339 WP_000622425.1 cell division regulator GpsB -
  QEP67_RS20045 (QEP67_19975) - 3876526..3877080 (-) 555 WP_353706387.1 DUF1273 domain-containing protein -
  QEP67_RS20050 (QEP67_19980) - 3877137..3877547 (-) 411 WP_046955205.1 CotD family spore coat protein -
  QEP67_RS20055 (QEP67_19985) - 3877703..3878251 (-) 549 WP_000487712.1 YppG family protein -
  QEP67_RS20060 (QEP67_19990) - 3878429..3878620 (+) 192 WP_000242661.1 YppF family protein -
  QEP67_RS20065 (QEP67_19995) - 3878647..3878991 (-) 345 WP_000872967.1 YppE family protein -
  QEP67_RS20070 (QEP67_20000) - 3879007..3879249 (-) 243 WP_001252042.1 hypothetical protein -
  QEP67_RS20075 (QEP67_20005) - 3879335..3879511 (+) 177 WP_001982922.1 hypothetical protein -
  QEP67_RS20080 (QEP67_20010) - 3879821..3880846 (-) 1026 WP_002108635.1 DUF2515 domain-containing protein -
  QEP67_RS20085 (QEP67_20015) recU 3880950..3881552 (+) 603 WP_000155596.1 Holliday junction resolvase RecU Machinery gene
  QEP67_RS20090 (QEP67_20020) - 3881619..3884303 (+) 2685 WP_001283111.1 PBP1A family penicillin-binding protein -
  QEP67_RS20095 (QEP67_20025) - 3884327..3884845 (-) 519 WP_000442672.1 YpoC family protein -
  QEP67_RS20100 (QEP67_20030) nth 3884849..3885496 (-) 648 WP_000933016.1 endonuclease III -
  QEP67_RS20105 (QEP67_20035) dnaD 3885512..3886219 (-) 708 WP_000728534.1 DNA replication protein DnaD -

Sequence

Protein


Download         Length: 200 a.a.        Molecular weight: 23371.65 Da        Isoelectric Point: 9.4276

>NTDB_id=818046 QEP67_RS20085 WP_000155596.1 3880950..3881552(+) (recU) [Bacillus cereus group sp. MS39]
MTIRYPNGKRYNQASQPHKTPIKKHTYSNRGMSLEEELNETNEYYLTHNIACVHKKPTPLQIVKVDYPARSAAVVKEAYF
KQPSTTDYNGVYKGKYIDFEAKETKNKTSFPLQNFHLHQIEHMKRVIAHDGIAFVIIKFTLFDELYLLDAKHIIAFWNRQ
NTGGRKSITKEEIEEHGSLLSCGYHPRIDYIRVLDTVYFS

Nucleotide


Download         Length: 603 bp        

>NTDB_id=818046 QEP67_RS20085 WP_000155596.1 3880950..3881552(+) (recU) [Bacillus cereus group sp. MS39]
ATGACCATTCGTTACCCAAACGGAAAACGGTACAATCAAGCTTCACAACCTCATAAAACACCAATTAAAAAACATACTTA
TAGTAATAGAGGTATGTCCCTTGAAGAGGAATTGAATGAAACAAATGAATATTACTTAACCCATAATATTGCATGTGTAC
ATAAAAAACCTACACCTCTTCAAATTGTAAAAGTAGATTACCCCGCTCGAAGTGCTGCAGTGGTAAAAGAAGCGTATTTT
AAACAACCTTCTACAACAGATTACAACGGTGTATACAAAGGGAAATACATCGATTTTGAAGCGAAAGAAACAAAAAATAA
AACCAGCTTTCCACTTCAAAACTTCCACCTTCATCAAATTGAACATATGAAGCGAGTAATCGCTCATGATGGAATTGCAT
TTGTTATTATTAAATTTACACTTTTTGATGAACTTTATTTACTAGATGCAAAACATATTATTGCATTTTGGAATCGTCAA
AATACTGGTGGACGGAAATCGATTACGAAAGAAGAAATAGAAGAGCATGGATCTTTATTATCATGCGGTTATCACCCTCG
GATTGATTATATCCGTGTACTAGACACGGTTTATTTTTCGTGA

Domains

Predicted by InterproScan.

Recombination protein U (RecU)

(30-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A8DKZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recU Bacillus subtilis subsp. subtilis str. 168

63

100

0.63