Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   QEP67_RS07350 Genome accession   NZ_CP123058
Coordinates   1382626..1383060 (+) Length   144 a.a.
NCBI ID   WP_000811502.1    Uniprot ID   A0A5C5ACH0
Organism   Bacillus cereus group sp. MS39     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1377626..1388060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP67_RS07330 (QEP67_07320) - 1378515..1379678 (-) 1164 WP_000434595.1 aminotransferase A -
  QEP67_RS07335 (QEP67_07325) - 1379802..1380002 (-) 201 WP_000929285.1 hypothetical protein -
  QEP67_RS07340 (QEP67_07330) kinB 1380312..1381586 (+) 1275 WP_000420379.1 sporulation sensor histidine kinase KinB -
  QEP67_RS07345 (QEP67_07335) - 1381639..1382388 (-) 750 WP_000387497.1 DUF3967 domain-containing protein -
  QEP67_RS07350 (QEP67_07340) nucA/comI 1382626..1383060 (+) 435 WP_000811502.1 DNA-entry nuclease Machinery gene
  QEP67_RS07355 (QEP67_07345) comJ 1383096..1383485 (+) 390 WP_000424013.1 competence protein ComJ -
  QEP67_RS07360 (QEP67_07350) metE 1383523..1385811 (-) 2289 WP_353706553.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  QEP67_RS07365 (QEP67_07355) - 1386472..1386903 (+) 432 WP_000438217.1 NUDIX hydrolase -
  QEP67_RS07370 (QEP67_07360) - 1387095..1387652 (-) 558 WP_000062072.1 PadR family transcriptional regulator -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16010.38 Da        Isoelectric Point: 8.4331

>NTDB_id=818038 QEP67_RS07350 WP_000811502.1 1382626..1383060(+) (nucA/comI) [Bacillus cereus group sp. MS39]
MKQLKGIIISIIAILSIVVAVYEVLVPEETSIKKTNAYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=818038 QEP67_RS07350 WP_000811502.1 1382626..1383060(+) (nucA/comI) [Bacillus cereus group sp. MS39]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTGTAGTAGCGGTGTATGAAGTACTTGTTCC
AGAAGAAACAAGTATCAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGAGCGATATCCAGAGACAGGGA
AACATATTACCGATGCTATAAAAGAAGGGCATTCAGAAGTTTGTACAATCGACCGTGGTGGCGCTGCGGATAGAAGAAAA
TTATCGTTAGCTCCATACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCAGCCGATAATCGCGGGGCAGGGTCTTGGGTAGGGAATAAGTTAGATAAATACC
CAGATGGTACACGTGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5C5ACH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

71.171

77.083

0.549