Detailed information NTG0817705

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: R3L10_RS08785
• Genome accession: NZ_CP137061
• Coordinates: 1852940..1854058 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SNUBHAB0274
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1847940..1859058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L10_RS08755 (R3L10_08765)	-	1848769..1849617 (+)	849	WP_000336548.1	class II glutamine amidotransferase	-
R3L10_RS08760 (R3L10_08770)	-	1849870..1850325 (+)	456	WP_000782976.1	bacteriohemerythrin	-
R3L10_RS08765 (R3L10_08775)	-	1850478..1851545 (+)	1068	WP_002019572.1	hypothetical protein	-
R3L10_RS08770 (R3L10_08780)	-	1851545..1851868 (+)	324	WP_000442587.1	RnfH family protein	-
R3L10_RS08775 (R3L10_08785)	-	1851923..1852321 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
R3L10_RS08780 (R3L10_08790)	fur	1852433..1852870 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
R3L10_RS08785 (R3L10_08795)	pilU	1852940..1854058 (-)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
R3L10_RS08790 (R3L10_08800)	pilT	1854086..1855123 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
R3L10_RS08795 (R3L10_08805)	-	1855250..1855942 (+)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=817705 R3L10_RS08785 WP_000347039.1 1852940..1854058(-) (pilU) [Acinetobacter baumannii strain SNUBHAB0274]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=817705 R3L10_RS08785 WP_000347039.1 1852940..1854058(-) (pilU) [Acinetobacter baumannii strain SNUBHAB0274]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395