Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   R0Q54_RS10725 Genome accession   NZ_CP136992
Coordinates   2004039..2004866 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain J46     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1999039..2009866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R0Q54_RS10700 (R0Q54_10700) efpO 2000102..2001544 (+) 1443 WP_017696384.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  R0Q54_RS10705 (R0Q54_10705) tmk 2001541..2002179 (+) 639 WP_015253015.1 dTMP kinase -
  R0Q54_RS10710 (R0Q54_10710) darA 2002253..2002582 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  R0Q54_RS10715 (R0Q54_10715) yaaR 2002595..2003035 (+) 441 WP_009966249.1 YaaR family protein -
  R0Q54_RS10720 (R0Q54_10720) holB 2003047..2004036 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  R0Q54_RS10725 (R0Q54_10725) yaaT 2004039..2004866 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  R0Q54_RS10730 (R0Q54_10730) yabA 2004881..2005240 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  R0Q54_RS10735 (R0Q54_10735) trmNF 2005299..2006042 (+) 744 WP_041338388.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  R0Q54_RS10740 (R0Q54_10740) yazA 2006029..2006328 (+) 300 WP_069837179.1 GIY-YIG nuclease family protein -
  R0Q54_RS10745 (R0Q54_10745) rsmI 2006303..2007181 (+) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  R0Q54_RS10750 (R0Q54_10750) abrB 2007230..2007520 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=817346 R0Q54_RS10725 WP_003226767.1 2004039..2004866(+) (yaaT) [Bacillus subtilis strain J46]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=817346 R0Q54_RS10725 WP_003226767.1 2004039..2004866(+) (yaaT) [Bacillus subtilis strain J46]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAACGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996