Detailed information NTG0817298

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: QAD57_RS05040
• Genome accession: NZ_CP122947
• Coordinates: 1075729..1077168 (-)
• Length: 479 a.a.
• NCBI ID: WP_286445393.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BS07
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1070729..1082168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QAD57_RS05015 (QAD57_05010)	recG	1071864..1073729 (-)	1866	WP_286445392.1	ATP-dependent DNA helicase RecG	-
QAD57_RS05020 (QAD57_05015)	-	1073810..1074163 (+)	354	WP_000836998.1	hypothetical protein	-
QAD57_RS05025 (QAD57_05020)	-	1074167..1074802 (+)	636	WP_000668030.1	outer membrane protein	-
QAD57_RS05030 (QAD57_05025)	-	1074799..1075551 (-)	753	WP_220947603.1	exodeoxyribonuclease III	-
QAD57_RS05040 (QAD57_05035)	comH	1075729..1077168 (-)	1440	WP_286445393.1	competence protein	Machinery gene
QAD57_RS05045 (QAD57_05040)	dnaA	1077390..1078757 (-)	1368	WP_286445394.1	chromosomal replication initiator protein DnaA	-
QAD57_RS05050 (QAD57_05045)	-	1078910..1079452 (+)	543	WP_286446351.1	purine-nucleoside phosphorylase	-
QAD57_RS05055 (QAD57_05050)	-	1079488..1079727 (+)	240	WP_015086414.1	DUF2443 family protein	-
QAD57_RS05060 (QAD57_05055)	glmS	1079728..1081521 (+)	1794	WP_286445395.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54990.03 Da
• Isoelectric Point: 7.2666

>NTDB_id=817298 QAD57_RS05040 WP_286445393.1 1075729..1077168(-) (comH) [Helicobacter pylori strain BS07]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKILDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELHPHQMPSLNAPMQKPQNKPHSSQQPPQNFSYPESKLGSKNPKNSLLQPL
ATPNKISSANEVKTPINDTKPPLKHSSEDQESNLFITPPTEKTLPNNTPNANINEHNESNENRDSVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRIDEYKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKATYERPKQDDQTEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=817298 QAD57_RS05040 WP_286445393.1 1075729..1077168(-) (comH) [Helicobacter pylori strain BS07]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCACATAAAGGCACTTTTAAGGCTAAAATCCTTGATTCTAAAGAACCAAGGCAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACTTTAAACCCTAACCGCCCTACTATTCCTAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTAAAAGAACTACACCCACACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAATAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAGCAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTAATATTA
ATGAACACAATGAAAGCAATGAAAATAGGGATAGTGTGGAAAAACAAGCCATTAGAGATCCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATGAATACAAACA
GACTGCGACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGAGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAGTTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCCTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAAGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.528	100	0.935