Detailed information NTG0817128

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: R3J34_RS08800
• Genome accession: NZ_CP136975
• Coordinates: 1841220..1844135 (+)
• Length: 971 a.a.
• NCBI ID: WP_004085953.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain CFBP8070
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1836220..1849135

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3J34_RS08775 (R3J34_08755)	murJ	1836921..1838531 (-)	1611	WP_154415599.1	murein biosynthesis integral membrane protein MurJ	-
R3J34_RS08780 (R3J34_08760)	rpsT	1838631..1838900 (+)	270	WP_010894866.1	30S ribosomal protein S20	-
R3J34_RS08785 (R3J34_08765)	obgE	1839017..1840090 (-)	1074	WP_004085947.1	GTPase ObgE	-
R3J34_RS08790 (R3J34_08770)	rpmA	1840265..1840522 (-)	258	WP_004085949.1	50S ribosomal protein L27	-
R3J34_RS08795 (R3J34_08775)	rplU	1840546..1840866 (-)	321	WP_031345770.1	50S ribosomal protein L21	-
R3J34_RS08800 (R3J34_08780)	uvrA	1841220..1844135 (+)	2916	WP_004085953.1	excinuclease ABC subunit UvrA	Machinery gene
R3J34_RS08805 (R3J34_08785)	-	1844243..1845178 (-)	936	WP_004085954.1	hypothetical protein	-
R3J34_RS08810 (R3J34_08790)	guaA	1845410..1846978 (-)	1569	WP_004085957.1	glutamine-hydrolyzing GMP synthase	-
R3J34_RS08815 (R3J34_08795)	guaB	1847216..1848673 (-)	1458	WP_004085959.1	IMP dehydrogenase	-

Sequence

Protein

• Length: 971 a.a.
• Molecular weight: 107704.87 Da
• Isoelectric Point: 6.9556

>NTDB_id=817128 R3J34_RS08800 WP_004085953.1 1841220..1844135(+) (uvrA) [Xylella fastidiosa subsp. multiplex strain CFBP8070]
MTALIRIRGARTHNLKNLNLDLPRNTLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLSVMEKPDLDQIEGL
SPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRCPDHHYPLEAQTVSQMVDHVLTLDPEQRYMLLAPVVRERK
GEHTQVFEQLRAQGFVRVRVDGELYEIDAVPTLTLRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGNGMASVQTLDT
TTTTPHLFSSKYSCPVCDYSLPELEPRLFSFNAPMGACPACNGLGVTEFFDPAKVVIHPDLSLSAGAVRGWDRRNAYYFQ
LIASLAKHYTFDIDASWESLPEEIRHTILFGSGDEQINFTYLTEAGGRTKRKHRFEGIVPNLERRYRETESAAVREELAK
YVSTRTCPECGGTRLNRAARNVFVADRTLPELTVLPINDALEFFKTLRLPGWRGEIAIKIVKEIGERLGFLVDVGLDYLT
LERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNTVIVVEHDEDAIRQADHILD
IGPGAGVHGGEICAQGSLEQIMAAPRSLTGQYLSGRRRIEIPKQRHPPNATKMLHLRGACGNNLKGVNLDIPEGLFTCIT
GVSGSGKSTLINDTLFTLAANEINGASHPIAPYASVDGLELFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVPE
ARARGYSPGRFSFNVRGGRCEACEGDGLIKVEMHFLPDVYVPCDVCQGKRYNRETLEIRYKGYNINDVLEMTVEDALKLF
EAVPAIARKLETLVDVGLSYLKLGQSATTLSGGEAQRVKLSKELSRRDTGRTLYILDEPTTGLHFYDIEALLAVLHKLRD
AGNTVIVIEHNLDVIKTADWVIDLGPEGGGRGGEILVAGTPEAVAAHPHSHTGHFLAKLLPPKDVSNCGLIGTLEKRLTL
HKRYTVREHPR

Nucleotide

• Length: 2916 bp

>NTDB_id=817128 R3J34_RS08800 WP_004085953.1 1841220..1844135(+) (uvrA) [Xylella fastidiosa subsp. multiplex strain CFBP8070]
GTGACGGCCCTCATCCGTATCCGCGGCGCGCGGACACACAACCTTAAGAATCTGAATCTTGACCTACCGCGTAACACACT
GATCGTCATTACCGGCCTCTCCGGCTCTGGCAAATCATCGTTGGCTTTTGACACGATCTACGCTGAAGGTCAGCGGCGCT
ATGTCGAATCACTGTCGGCCTACGCGCGGCAGTTTTTAAGCGTGATGGAAAAGCCGGATCTGGACCAGATTGAAGGGCTG
TCTCCGGCTATTTCAATTGAACAAAAGTCAACCTCGCATAATCCCCGCTCCACCGTCGGTACGATCACCGAGATCTACGA
TTATTTGCGTCTGCTGTATGCACGTGTCGGACAACCGCGCTGCCCGGACCATCATTACCCGCTGGAAGCACAAACAGTGA
GCCAGATGGTGGATCACGTATTGACCTTGGATCCAGAGCAGCGCTACATGCTGTTGGCACCTGTGGTACGTGAGCGCAAG
GGTGAACATACCCAAGTGTTCGAACAACTGCGTGCACAAGGCTTTGTGCGCGTGCGCGTGGATGGCGAACTGTATGAGAT
CGACGCGGTGCCAACACTGACACTGCGTCAGAAGCATACGATTGAAGCGGTCATTGACCGTTTTCGCCCACGTGAAGACA
TCAAGCAACGTTTGGCGGAAAGCTTTGAAACTGCATTGAAGTTGGGCAACGGGATGGCTTCGGTCCAAACGCTGGACACA
ACAACAACCACACCACACCTGTTTTCCTCTAAGTACTCCTGTCCAGTATGCGATTATTCGCTACCGGAATTAGAGCCACG
GTTGTTCTCCTTCAACGCCCCGATGGGGGCGTGCCCCGCGTGCAACGGTCTGGGAGTCACCGAGTTTTTCGACCCGGCCA
AGGTCGTCATACATCCAGATCTTTCACTGTCAGCTGGTGCTGTGCGTGGTTGGGACCGCCGCAACGCTTACTATTTTCAA
TTGATCGCTTCGCTCGCCAAGCACTATACGTTCGACATTGACGCATCATGGGAATCGCTCCCTGAAGAAATCCGTCATAC
CATCCTGTTCGGCAGTGGCGATGAGCAGATCAACTTCACCTATTTGACGGAAGCTGGAGGGCGTACCAAGCGCAAGCATC
GCTTTGAAGGCATTGTGCCGAACCTAGAGCGCCGCTACCGTGAGACAGAATCCGCTGCCGTACGTGAGGAACTGGCCAAG
TACGTCAGTACGCGGACCTGCCCGGAGTGCGGCGGCACACGTCTGAACCGCGCCGCACGCAATGTATTTGTTGCCGATCG
GACGCTCCCTGAGCTGACAGTGCTGCCAATTAATGACGCATTGGAATTCTTCAAAACGCTACGCCTGCCAGGCTGGCGTG
GTGAGATCGCAATTAAAATTGTCAAAGAAATCGGGGAGCGTCTCGGCTTCCTGGTCGATGTTGGTCTGGACTACCTAACA
TTGGAGCGTAAGGCCGACACCCTCTCTGGTGGTGAAGCACAACGTATCCGCCTAGCGAGTCAGATCGGTGCTGGTCTAGT
GGGAGTGATGTATGTGCTGGACGAACCCTCCATCGGATTGCACCAGCGTGATAACGAACGCCTGCTCGGTACACTAACTC
GGTTGCGCGACCTTGGTAATACGGTGATTGTCGTTGAACACGACGAGGACGCCATCCGCCAAGCCGACCATATTCTCGAC
ATTGGTCCCGGTGCCGGTGTGCATGGTGGTGAGATCTGTGCTCAGGGGTCGTTGGAACAGATTATGGCCGCGCCGCGCTC
CTTGACTGGCCAATACTTATCCGGTCGACGCCGGATTGAAATCCCCAAACAGCGCCACCCCCCCAACGCCACGAAGATGC
TGCACCTACGCGGCGCCTGCGGTAATAACCTTAAAGGCGTTAATCTTGACATCCCTGAGGGTCTGTTTACTTGCATTACT
GGGGTGTCCGGCTCCGGTAAATCGACGCTCATCAACGACACGTTGTTTACGTTAGCCGCAAACGAGATCAATGGTGCTTC
TCATCCCATTGCGCCGTATGCGTCAGTCGATGGTCTAGAGCTGTTCGACAAAGTGGTAGACATTGATCAATCACCGATCG
GACGCACGCCACGCTCCAACCCAGCAACCTACACTGGCATGTTCACCCCGTTACGCGAGCTCTTTGCGCAGGTTCCGGAG
GCGCGCGCGCGCGGTTATTCTCCAGGACGTTTCAGCTTCAACGTGCGCGGTGGGCGCTGTGAAGCGTGTGAGGGCGACGG
GCTGATTAAGGTTGAAATGCACTTTTTACCCGACGTCTACGTGCCATGCGATGTATGTCAAGGCAAACGTTACAACCGTG
AGACGCTGGAAATACGATACAAGGGATATAACATCAACGACGTGCTGGAGATGACCGTTGAAGATGCCTTAAAACTGTTT
GAAGCAGTACCAGCAATTGCACGCAAGCTGGAAACTTTGGTAGATGTAGGCTTGAGCTACCTCAAACTCGGCCAGAGTGC
GACGACGCTATCAGGCGGTGAGGCGCAGCGTGTCAAATTGTCCAAAGAGCTGTCACGACGCGACACCGGACGCACGCTGT
ATATCCTTGACGAACCAACCACTGGGCTGCATTTTTACGACATTGAAGCGCTGCTGGCAGTACTGCACAAACTGCGCGAT
GCAGGGAATACGGTCATCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCGGATTGGGTCATTGATCTCGGCCCGGA
GGGAGGCGGACGCGGTGGTGAAATCCTGGTGGCCGGCACTCCTGAAGCGGTGGCTGCGCATCCTCACTCGCATACTGGCC
ACTTCTTAGCCAAGCTGTTACCTCCTAAGGATGTATCCAACTGCGGTCTCATCGGAACCCTAGAGAAGAGGTTGACATTG
CACAAACGGTACACCGTTAGAGAACATCCACGATGA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (291-400)

• ABC transporter (ABC_tran) (624-860)

• UvrA interaction domain (UvrA_inter) (131-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	55.851	96.807	0.541
uvrA	Streptococcus pneumoniae TIGR4	55.851	96.807	0.541
uvrA	Streptococcus pneumoniae D39	55.851	96.807	0.541