Detailed information NTG0816338

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: RJD36_RS05255
• Genome accession: NZ_CP136943
• Coordinates: 1001195..1003303 (-)
• Length: 702 a.a.
• NCBI ID: WP_117508654.1
• Uniprot ID: -
• Organism: Streptococcus pasteurianus strain WUSP082
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 996195..1008303

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJD36_RS05225 (RJD36_05225)	-	996972..997715 (+)	744	Protein_964	amino acid permease	-
RJD36_RS05230 (RJD36_05230)	-	997739..997966 (+)	228	WP_325052498.1	homocysteine S-methyltransferase family protein	-
RJD36_RS05235 (RJD36_05235)	-	998017..998916 (+)	900	WP_117508652.1	YafY family protein	-
RJD36_RS05240 (RJD36_05240)	-	998975..999583 (+)	609	WP_117508653.1	GyrI-like domain-containing protein	-
RJD36_RS05245 (RJD36_05245)	-	999665..1000333 (-)	669	WP_039694591.1	YoaK family protein	-
RJD36_RS05250 (RJD36_05250)	-	1000442..1001089 (-)	648	WP_048791465.1	endonuclease III domain-containing protein	-
RJD36_RS05255 (RJD36_05255)	clpE	1001195..1003303 (-)	2109	WP_117508654.1	AAA family ATPase	Regulator
RJD36_RS05260 (RJD36_05260)	rplJ	1003832..1004335 (+)	504	WP_003065189.1	50S ribosomal protein L10	-
RJD36_RS05265 (RJD36_05265)	rplL	1004405..1004773 (+)	369	WP_003065188.1	50S ribosomal protein L7/L12	-
RJD36_RS05270 (RJD36_05270)	-	1005055..1005219 (-)	165	WP_233437503.1	hypothetical protein	-
RJD36_RS05275 (RJD36_05275)	-	1005763..1006713 (-)	951	WP_058692265.1	polysaccharide deacetylase family protein	-

Sequence

Protein

• Length: 702 a.a.
• Molecular weight: 77287.96 Da
• Isoelectric Point: 4.7264

>NTDB_id=816338 RJD36_RS05255 WP_117508654.1 1001195..1003303(-) (clpE) [Streptococcus pasteurianus strain WUSP082]
MANNNFYGRNPFGNMDDIFNELMSNMGGYNSENRRYLINGREVTPEEFAQYRQTGNLPGNAEYQEGASSSAPKEDGILAK
LGTNLTERARANELDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDIS
GLEAGTQYRGAFEENIQNLVKEVKDAGNIILFFDEIHQILGAGSTGSDSGSKGLADILKPALSRGELTVIGATTQDEYRN
TILKNAALARRFNEVKVNAPSAQDSFNILMGIRDLYEKHHNVILPDNVLKAAVDFSIQYIPQRSLPDKAIDLIDMTAAHL
AAQHPATDVKSLEKEIADQKEKQENAVAKEDYEAALNAKVRIEELQKQIDNHTEGQKVTATVNDVAESVERLTGVPVSNM
GASDIERLKELASRLKGKVIGQDEAVEAVSRAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKDAIIR
LDMSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTINFK
NTVIIATSNAGFGNEALTGQDDKDKKIMDRIAPYFRPEFLNRFNGIIEFSHLTKEDLNDIVDLMLDEVSKTIAKKGIDLV
VSDAAKQHLIEEGYDEAMGVRPLRRVIEQEIRDKITDFYLDHTEVRHLKADMVDGELVISEK

Nucleotide

• Length: 2109 bp

>NTDB_id=816338 RJD36_RS05255 WP_117508654.1 1001195..1003303(-) (clpE) [Streptococcus pasteurianus strain WUSP082]
ATGGCAAATAATAATTTTTACGGAAGAAATCCTTTTGGAAATATGGATGATATTTTTAACGAACTTATGAGTAACATGGG
CGGGTACAATTCAGAAAACAGACGCTATTTGATTAATGGGCGCGAAGTTACTCCTGAAGAATTTGCACAATATCGCCAAA
CAGGTAACCTCCCTGGAAACGCGGAATACCAAGAAGGGGCGTCTAGTTCTGCTCCTAAAGAAGATGGTATCTTGGCAAAA
TTAGGAACAAACTTGACCGAACGCGCACGCGCTAACGAACTCGACCCTGTTATTGGACGTAACAAAGAAATCCAAGAAAC
TGCTGAAATCTTGTCACGTCGTACTAAAAACAATCCTGTCCTTGTTGGGGATGCAGGTGTTGGTAAAACAGCCGTTGTCG
AAGGCTTAGCGCAAGCTATTGTCAATGGTGATGTGCCAGCAGCTATCAAAAATAAAGAAATTATTTCTATTGATATTTCT
GGTCTTGAAGCTGGCACACAATATCGTGGTGCTTTTGAAGAAAATATCCAAAACCTTGTCAAAGAAGTTAAAGACGCTGG
TAATATCATTCTCTTCTTTGATGAAATCCACCAAATTTTAGGCGCAGGGTCAACTGGTAGCGACTCTGGTTCGAAAGGCT
TAGCTGACATTCTCAAACCTGCACTTTCTCGTGGTGAATTGACCGTTATCGGTGCAACAACTCAAGACGAGTATCGTAAT
ACTATTTTGAAAAATGCTGCGCTCGCTCGCCGTTTCAACGAAGTTAAAGTAAATGCTCCTTCTGCTCAAGATAGCTTTAA
CATTTTAATGGGAATTCGTGATTTATATGAAAAACACCACAACGTTATTCTCCCCGATAATGTGTTAAAAGCCGCTGTTG
ATTTTTCAATTCAATATATCCCACAACGTAGTTTACCAGATAAAGCTATTGACTTGATTGATATGACTGCTGCTCATTTG
GCTGCTCAACACCCTGCAACTGATGTCAAATCTCTTGAAAAGGAAATTGCAGACCAAAAAGAAAAACAAGAAAATGCTGT
GGCTAAAGAAGATTATGAAGCAGCTCTCAATGCCAAGGTTCGTATCGAAGAATTGCAAAAACAAATTGACAACCATACGG
AAGGGCAAAAAGTTACAGCTACCGTTAATGATGTGGCAGAATCTGTCGAACGATTAACTGGTGTTCCCGTGTCAAATATG
GGAGCAAGTGATATTGAACGCTTGAAAGAATTAGCTAGCCGTTTGAAAGGTAAAGTCATAGGACAAGATGAGGCTGTTGA
AGCCGTCTCACGTGCCATTCGTCGTAACCGTGCTGGCTTTGACGAAGGTAATCGACCAATTGGTAGTTTCCTCTTTGTCG
GTCCTACTGGCGTTGGTAAGACAGAGCTTGCTAAACAATTAGCCCTTGATATGTTTGGCTCAAAAGATGCTATTATCCGC
CTTGATATGTCTGAATACTCTGATCGCACAGCCGTTTCTAAATTAATCGGTACAACTGCTGGCTATGTTGGCTACGACGA
CAATAGCAACACGCTTACTGAACGTGTTCGTCGTAACCCATACTCAATTATTCTTCTTGATGAAATTGAAAAAGCTGACC
CTCAAGTCATCACACTTCTTCTCCAAGTTTTGGATGATGGTCGTTTGACAGACGGTCAAGGTAATACGATTAACTTTAAA
AATACCGTCATCATTGCTACCTCTAATGCCGGATTTGGCAATGAAGCTTTGACTGGTCAAGATGATAAAGACAAGAAAAT
TATGGATCGTATCGCCCCATACTTCCGCCCTGAATTTCTTAACCGTTTCAACGGCATTATTGAATTCTCTCACTTGACTA
AAGAAGATTTGAACGACATTGTTGACTTAATGCTTGACGAAGTTAGCAAGACTATTGCCAAGAAAGGCATTGATTTGGTG
GTTAGTGATGCTGCTAAACAACACCTTATCGAAGAAGGTTATGATGAAGCCATGGGTGTTCGACCACTCCGCCGTGTCAT
TGAACAAGAAATCCGCGATAAAATCACTGATTTCTATCTCGATCACACAGAGGTTAGACACCTTAAAGCTGACATGGTTG
ACGGAGAACTAGTCATCAGCGAAAAATAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (612-683)

• AAA lid domain (AAA_lid_9) (262-355)

• ATPase family associated with various cellular activities (AAA) (AAA) (120-252)

• AAA domain (Cdc48 subfamily) (AAA_2) (445-604)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	46.884	100	0.472
clpC	Lactococcus lactis subsp. cremoris KW2	51.411	90.883	0.467
clpE	Streptococcus pneumoniae Rx1	48.287	91.453	0.442
clpE	Streptococcus pneumoniae D39	48.287	91.453	0.442
clpE	Streptococcus pneumoniae R6	48.287	91.453	0.442
clpE	Streptococcus pneumoniae TIGR4	48.352	90.741	0.439
clpC	Bacillus subtilis subsp. subtilis str. 168	45.511	92.023	0.419
clpC	Streptococcus pneumoniae Rx1	44.076	90.171	0.397
clpC	Streptococcus pneumoniae D39	44.076	90.171	0.397
clpC	Streptococcus pneumoniae TIGR4	44.127	89.744	0.396
clpC	Streptococcus thermophilus LMD-9	43.71	88.319	0.386
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	43.153	89.459	0.386
clpC	Streptococcus thermophilus LMG 18311	43.528	88.034	0.383
clpC	Streptococcus mutans UA159	43.018	88.746	0.382