Detailed information NTG0816254

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: QCM40_RS01730
• Genome accession: NZ_CP122516
• Coordinates: 337105..338541 (-)
• Length: 478 a.a.
• NCBI ID: WP_279955611.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain HP34
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 332105..343541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QCM40_RS01705 (QCM40_01705)	recG	333239..335104 (-)	1866	WP_279955606.1	ATP-dependent DNA helicase RecG	-
QCM40_RS01710 (QCM40_01710)	-	335186..335539 (+)	354	WP_279956550.1	hypothetical protein	-
QCM40_RS01715 (QCM40_01715)	-	335543..336178 (+)	636	WP_279955608.1	outer membrane protein	-
QCM40_RS01720 (QCM40_01720)	-	336175..336927 (-)	753	WP_279955610.1	exodeoxyribonuclease III	-
QCM40_RS01730 (QCM40_01730)	comH	337105..338541 (-)	1437	WP_279955611.1	competence protein	Machinery gene
QCM40_RS01735 (QCM40_01735)	dnaA	338770..340137 (-)	1368	WP_279955612.1	chromosomal replication initiator protein DnaA	-
QCM40_RS01740 (QCM40_01740)	-	340289..340831 (+)	543	WP_279955613.1	purine-nucleoside phosphorylase	-
QCM40_RS01745 (QCM40_01745)	-	340867..341106 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
QCM40_RS01750 (QCM40_01750)	glmS	341107..342900 (+)	1794	WP_279955615.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 478 a.a.
• Molecular weight: 54766.72 Da
• Isoelectric Point: 6.9148

>NTDB_id=816254 QCM40_RS01730 WP_279955611.1 337105..338541(-) (comH) [Helicobacter pylori strain HP34]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGIYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPHSSQQHPQNFSYPEPKLGSKNPKNSLLQPL
ATPNKSSANEVKVPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNTPNTDISENNENNENRDNVEKQAIRDPNIKEFAC
GKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARS
STEKCKRARARKDGTTRQCYLIEEPLKQAWESEYQITTQLVKAVYERPKQDDQTEPTFYETSELAYSSTRKSEITHNELN
LNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVCFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1437 bp

>NTDB_id=816254 QCM40_RS01730 WP_279955611.1 337105..338541(-) (comH) [Helicobacter pylori strain HP34]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAACTTTTAGAAGA
AATCAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAGGTTTTAGGCATTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGTCCTACTATTCCCAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAACTACACCCACACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACATCCTCAAAACTTTTCTTACCCAGAACCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAAGCTCTGCTAATGAAGTTAAAGTGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTCAGA
AGATCAAGAAAACAACCTCTTTATAGCGCCACCCACTGAAAAAACGCTCCCTAATAACACCCCTAACACTGATATTAGTG
AAAACAATGAAAACAATGAGAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATCCTAATATTAAGGAATTTGCGTGC
GGGAAGTGGGTTTATGACGATGAAAATTTACAAGCTTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGAC
TGCGACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGTGGTAAAATCACTACCCCCTATACTAAAATCT
CTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGC
TCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTTAAA
ACAAGCGTGGGAGAGCGAGTATCAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGTCCCAAACAAGACGATCAAA
CAGAGCCGACTTTCTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTGAAT
TTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATA
CAAAGAATGGGTTAAAAACCATGTGTGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCA
AAAGCACGCCTTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.111	100	0.933