Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   R0792_RS11320 Genome accession   NZ_CP136842
Coordinates   2460809..2461165 (-) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa PA14     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2455809..2466165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R0792_RS11295 - 2456175..2456807 (-) 633 WP_003091112.1 DUF4823 domain-containing protein -
  R0792_RS11300 - 2456872..2457768 (-) 897 WP_003091113.1 radical SAM protein -
  R0792_RS11305 - 2457935..2458573 (-) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  R0792_RS11310 - 2458659..2459792 (+) 1134 WP_127005313.1 aminotransferase class V-fold PLP-dependent enzyme -
  R0792_RS11315 - 2460018..2460794 (-) 777 WP_003091117.1 TatD family hydrolase -
  R0792_RS11320 pilZ 2460809..2461165 (-) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  R0792_RS11325 - 2461199..2462185 (-) 987 WP_003138609.1 DNA polymerase III subunit delta' -
  R0792_RS11330 tmk 2462178..2462810 (-) 633 WP_003138599.1 dTMP kinase -
  R0792_RS11335 mltG 2462839..2463888 (-) 1050 WP_003091127.1 endolytic transglycosylase MltG -
  R0792_RS11340 pabC 2463894..2464709 (-) 816 WP_003091129.1 aminodeoxychorismate lyase -
  R0792_RS11345 fabF 2464709..2465953 (-) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=815902 R0792_RS11320 WP_003091119.1 2460809..2461165(-) (pilZ) [Pseudomonas aeruginosa PA14]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=815902 R0792_RS11320 WP_003091119.1 2460809..2461165(-) (pilZ) [Pseudomonas aeruginosa PA14]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains

Predicted by InterProScan.

PilZ domain (PilZ)

(17-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449
  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449