Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO15_RS11530 | Genome accession | NZ_CP122485 |
| Coordinates | 2313434..2313937 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain SW-MRSA57 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2313434..2335727 | 2313434..2313937 | within | 0 |
Gene organization within MGE regions
Location: 2313434..2335727
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO15_RS11530 (QAO15_11530) | ssbA | 2313434..2313937 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO15_RS11535 (QAO15_11535) | rpsR | 2313989..2314231 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| QAO15_RS11540 (QAO15_11540) | - | 2314463..2315182 (-) | 720 | WP_000400841.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QAO15_RS11545 (QAO15_11545) | - | 2315295..2316509 (-) | 1215 | WP_000270135.1 | tyrosine-type recombinase/integrase | - |
| QAO15_RS11550 (QAO15_11550) | - | 2316670..2317293 (-) | 624 | WP_000230361.1 | helix-turn-helix domain-containing protein | - |
| QAO15_RS11555 (QAO15_11555) | - | 2317442..2317606 (+) | 165 | WP_001611932.1 | helix-turn-helix domain-containing protein | - |
| QAO15_RS11560 (QAO15_11560) | - | 2317607..2317879 (+) | 273 | WP_031870322.1 | helix-turn-helix domain-containing protein | - |
| QAO15_RS11565 (QAO15_11565) | - | 2317891..2318064 (+) | 174 | WP_000784892.1 | hypothetical protein | - |
| QAO15_RS11570 (QAO15_11570) | - | 2318031..2318234 (+) | 204 | WP_001231376.1 | hypothetical protein | - |
| QAO15_RS11575 (QAO15_11575) | - | 2318236..2318619 (+) | 384 | WP_000403837.1 | hypothetical protein | - |
| QAO15_RS11580 (QAO15_11580) | tscT | 2318620..2318946 (+) | 327 | WP_001103967.1 | type II toxin-antitoxin system toxin TscT | - |
| QAO15_RS11585 (QAO15_11585) | - | 2319011..2319880 (+) | 870 | WP_031870360.1 | primase alpha helix C-terminal domain-containing protein | - |
| QAO15_RS11590 (QAO15_11590) | - | 2319892..2321262 (+) | 1371 | WP_000151864.1 | phage/plasmid primase, P4 family | - |
| QAO15_RS11595 (QAO15_11595) | - | 2321505..2321861 (+) | 357 | WP_001059599.1 | hypothetical protein | - |
| QAO15_RS11600 (QAO15_11600) | - | 2321863..2322126 (+) | 264 | WP_001003076.1 | hypothetical protein | - |
| QAO15_RS11605 (QAO15_11605) | - | 2322128..2322769 (+) | 642 | WP_031870361.1 | pathogenicity island protein | - |
| QAO15_RS11610 (QAO15_11610) | - | 2323477..2323821 (+) | 345 | WP_001288442.1 | hypothetical protein | - |
| QAO15_RS11615 (QAO15_11615) | - | 2323852..2324505 (+) | 654 | WP_000214170.1 | hypothetical protein | - |
| QAO15_RS11620 (QAO15_11620) | - | 2324558..2325085 (+) | 528 | WP_031870369.1 | spore coat protein | - |
| QAO15_RS11625 (QAO15_11625) | - | 2325217..2325429 (+) | 213 | WP_001656917.1 | hypothetical protein | - |
| QAO15_RS11630 (QAO15_11630) | - | 2325426..2325995 (+) | 570 | WP_001293071.1 | terminase small subunit | - |
| QAO15_RS11635 (QAO15_11640) | - | 2326272..2327240 (+) | 969 | WP_000801980.1 | Abi family protein | - |
| QAO15_RS11640 (QAO15_11645) | - | 2327418..2327819 (+) | 402 | WP_000683457.1 | hypothetical protein | - |
| QAO15_RS11645 (QAO15_11650) | - | 2327937..2328449 (+) | 513 | WP_000813311.1 | hypothetical protein | - |
| QAO15_RS11650 (QAO15_11655) | - | 2328465..2328644 (+) | 180 | WP_000797954.1 | hypothetical protein | - |
| QAO15_RS11655 (QAO15_11660) | - | 2328763..2329935 (+) | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
| QAO15_RS11660 (QAO15_11665) | - | 2330779..2331717 (-) | 939 | WP_001817700.1 | Abi family protein | - |
| QAO15_RS11665 (QAO15_11670) | - | 2331756..2332469 (-) | 714 | Protein_2277 | tyrosine-type recombinase/integrase | - |
| QAO15_RS11670 (QAO15_11675) | selX | 2332675..2333286 (+) | 612 | WP_000475325.1 | staphylococcal enterotoxin-like toxin X | - |
| QAO15_RS11675 (QAO15_11680) | - | 2333655..2334023 (+) | 369 | WP_000849163.1 | YxeA family protein | - |
| QAO15_RS11680 (QAO15_11685) | - | 2334204..2334776 (+) | 573 | WP_000769722.1 | PepSY domain-containing protein | - |
| QAO15_RS11685 (QAO15_11690) | - | 2334913..2335176 (-) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| QAO15_RS11690 (QAO15_11695) | - | 2335476..2335727 (+) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=815862 QAO15_RS11530 WP_000934799.1 2313434..2313937(+) (ssbA) [Staphylococcus aureus strain SW-MRSA57]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=815862 QAO15_RS11530 WP_000934799.1 2313434..2313937(+) (ssbA) [Staphylococcus aureus strain SW-MRSA57]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |