Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RYQ61_RS06720 Genome accession   NZ_CP136799
Coordinates   1300465..1301151 (+) Length   228 a.a.
NCBI ID   WP_003073462.1    Uniprot ID   A0ABS3GAQ5
Organism   Streptococcus intermedius strain XH2169     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1295465..1306151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RYQ61_RS06700 (RYQ61_06700) - 1295603..1296235 (+) 633 WP_003028311.1 DUF421 domain-containing protein -
  RYQ61_RS06705 (RYQ61_06705) - 1296598..1296858 (-) 261 WP_003043441.1 SemiSWEET family transporter -
  RYQ61_RS06710 (RYQ61_06710) metG 1297105..1299102 (+) 1998 WP_102567765.1 methionine--tRNA ligase -
  RYQ61_RS06715 (RYQ61_06715) - 1299192..1300373 (-) 1182 WP_102567764.1 DUF2974 domain-containing protein -
  RYQ61_RS06720 (RYQ61_06720) braR 1300465..1301151 (+) 687 WP_003073462.1 response regulator transcription factor Regulator
  RYQ61_RS06725 (RYQ61_06725) - 1301135..1302115 (+) 981 WP_003073460.1 sensor histidine kinase -
  RYQ61_RS06730 (RYQ61_06730) - 1302238..1302996 (+) 759 WP_003078156.1 TraX family protein -
  RYQ61_RS06735 (RYQ61_06735) - 1303214..1303993 (+) 780 WP_021002991.1 ABC transporter ATP-binding protein -
  RYQ61_RS06740 (RYQ61_06740) - 1303974..1305953 (+) 1980 WP_317289671.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26383.70 Da        Isoelectric Point: 5.0048

>NTDB_id=815685 RYQ61_RS06720 WP_003073462.1 1300465..1301151(+) (braR) [Streptococcus intermedius strain XH2169]
MHKILLVEDDAVIRQQVKKMLEQWGFEVIAVEDFMQVLTIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMMYDGEVITLTKNEFQIL
RVLFEHSGSIVSRDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEVGLKNFIETKKGIGYRLINGTSE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=815685 RYQ61_RS06720 WP_003073462.1 1300465..1301151(+) (braR) [Streptococcus intermedius strain XH2169]
ATGCACAAGATATTATTAGTGGAAGACGATGCCGTCATTCGTCAACAAGTCAAAAAAATGCTGGAACAATGGGGATTTGA
GGTGATTGCTGTAGAGGATTTTATGCAGGTGTTGACGATTTTTGTTAAGGAAGAACCGCATCTAGTCCTGATGGATATTG
GTTTACCGTTGTTTAATGGTTATCATTGGTGCCAAGAAATTCGCAAGATTTCTAAAGTGCCTATTATGTTTTTATCTTCA
CGTGATCAGGCGATGGATATTGTCATGGCGATTAACATGGGCGGAGATGATTTTGTGACGAAGCCATTTGACAATAATGT
CTTGCTGGCTAAGGTTCAAGGACTCTTGCGTCGTTCGTATGAATTTGGGACAGATCAAAGTTTGTTGGAATACCATGGGG
TTATTCTCAATCTCAAGTCCATGGATATGATGTATGATGGAGAGGTGATTACGTTAACGAAAAATGAATTTCAAATTCTG
CGTGTGCTATTTGAGCATTCTGGCAGTATTGTTTCGCGTGATGATCTCATGAAAGAACTTTGGAATAGTGATTTCTTTAT
TGATGATAATACCTTATCTGTGAATGTTGCACGGCTGCGCAAGAAATTAGAAGAAGTCGGTCTCAAGAATTTCATTGAAA
CAAAGAAAGGTATAGGGTACAGGTTAATCAATGGAACATCAGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.545

96.491

0.478