NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	R1Y80_RS19695	Genome accession	NZ_CP136798
Coordinates	4329490..4332081 (+)	Length	863 a.a.
NCBI ID	WP_100559737.1	Uniprot ID	-
Organism	Streptomyces sp. JL1001
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4324490..4337081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R1Y80_RS19665 (R1Y80_19640)	-	4324518..4325057 (-)	540	WP_354597580.1	hypothetical protein	-
R1Y80_RS19670 (R1Y80_19645)	-	4325106..4326119 (-)	1014	WP_354597581.1	helix-turn-helix transcriptional regulator	-
R1Y80_RS19675 (R1Y80_19650)	-	4326216..4326986 (+)	771	WP_354597582.1	transposase	-
R1Y80_RS19680 (R1Y80_19655)	-	4327200..4328210 (-)	1011	WP_176725591.1	helix-turn-helix transcriptional regulator	-
R1Y80_RS19685 (R1Y80_19660)	-	4328512..4328832 (+)	321	WP_003967571.1	hypothetical protein	-
R1Y80_RS19690 (R1Y80_19665)	-	4328943..4329344 (-)	402	WP_032776753.1	TIGR03618 family F420-dependent PPOX class oxidoreductase	-
R1Y80_RS19695 (R1Y80_19670)	clpC	4329490..4332081 (+)	2592	WP_100559737.1	ATP-dependent chaperone ClpB	Regulator
R1Y80_RS19700 (R1Y80_19675)	-	4332240..4332785 (+)	546	WP_100559735.1	YbjN domain-containing protein	-
R1Y80_RS19705 (R1Y80_19680)	-	4332889..4334055 (-)	1167	WP_354597583.1	pyridoxal phosphate-dependent aminotransferase	-
R1Y80_RS19710 (R1Y80_19685)	-	4334195..4334476 (+)	282	WP_354598923.1	hypothetical protein	-
R1Y80_RS19715 (R1Y80_19690)	-	4334798..4335319 (+)	522	WP_100559729.1	DUF2617 family protein	-
R1Y80_RS19720 (R1Y80_19695)	-	4335387..4336985 (+)	1599	WP_354597584.1	polyamine aminopropyltransferase	-

Sequence

Protein

Download Length: 863 a.a. Molecular weight: 94283.83 Da Isoelectric Point: 4.7264

                                >NTDB_id=815566 R1Y80_RS19695 WP_100559737.1 4329490..4332081(+) (clpC) [Streptomyces sp. JL1001]

MDAELTNKSRDAINAATNRAVKDGHPDLTPGHLLLALLEGQENENIIDLLAAVEADLALVRGETERLLGGLPSVTGSTVA

PPQPNRELLAVIQDAAQRAKELGDDYISTEHLLIGIAAKGGRAGEILDGQGAGAKKLLAAFETSRGGRRVTTPDPEGQYK

ALEKFGTDFTAAAREGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVS

LDLGAMVAGAKYRGEFEERLKTVLSEIKESDGRIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE

YRERIEKDPALERRFQQVLVAEPSVEDTIAILRGLKGRYEAHHKVQIADSALVAAATLSDRYITSRFLPDKAIDLVDEAA

SRLRMEIDSSPLEIDELQRSVDRLRMEELALKNESDAASKERLAKLRRDLADREEELRGLNARWEKEKQGLNRVGELKER

LDELRGQAERAQRDGDFDAASKLLYGEIPGLERELEEAAEAEQEASKDKDTMVKEEVGPDDIADVVGAWTGIPAGRLLEG

ETQKLLRMESELGKRLIGQTEAVQAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDM

SEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNSIL

ILTSNLGSQFLMDPLVKPEVKKQQVLDVVRASFKPEFINRLDDLVVFSALSGDELAHIAGLQIDRLAARLADRRLTLDVT

PEALAWLAQEGNDPAYGARPLRRLIQTAIGDRLAKEILSGEVRDGDTVRVDRAEDGLIVGPAS

Nucleotide

Download Length: 2592 bp

                                >NTDB_id=815566 R1Y80_RS19695 WP_100559737.1 4329490..4332081(+) (clpC) [Streptomyces sp. JL1001]

GTGGACGCCGAGCTGACCAACAAGAGCCGCGACGCCATCAACGCGGCCACCAACCGGGCCGTGAAGGACGGGCACCCCGA

CCTGACCCCGGGGCACCTGCTGCTCGCGCTGCTGGAGGGGCAGGAGAACGAGAACATCATCGATCTGCTCGCCGCCGTCG

AGGCCGATCTGGCGCTGGTGCGCGGCGAGACCGAGCGGCTGCTCGGGGGGCTGCCCAGCGTCACCGGGTCCACCGTCGCC

CCGCCGCAGCCCAACCGCGAGCTGCTCGCCGTCATCCAGGACGCGGCCCAGCGGGCCAAGGAGCTGGGCGACGACTACAT

CTCCACCGAGCACCTGCTCATCGGTATCGCCGCGAAGGGCGGCCGGGCCGGTGAGATCCTCGACGGACAAGGGGCCGGCG

CCAAGAAGCTGCTGGCCGCGTTCGAGACGAGCAGGGGAGGGCGCCGGGTGACCACACCCGACCCGGAGGGCCAGTACAAG

GCCCTGGAGAAGTTCGGCACCGACTTCACGGCCGCCGCGCGCGAGGGCAAGCTGGATCCGGTCATCGGCCGCGACCAGGA

GATCCGCCGCGTCGTGCAGGTGCTGTCGCGCCGGACGAAGAACAACCCCGTCCTCATCGGTGAGCCCGGCGTCGGCAAGA

CCGCCGTCGTCGAAGGCCTCGCCCAGCGCATCGTCAAGGGCGACGTCCCGGAGAGCCTCAAGGACAAGCGGCTCGTCTCG

CTGGACCTCGGCGCCATGGTCGCGGGCGCGAAGTACCGCGGCGAGTTCGAGGAGCGGCTGAAGACCGTCCTCTCCGAGAT

CAAGGAGAGCGACGGCCGGATCATCACGTTCATCGACGAGCTGCACACCGTCGTCGGCGCCGGCGCGGGCGGCGACTCCG

CCATGGACGCGGGCAACATGCTCAAGCCGATGCTGGCCCGCGGCGAGCTGCGCATGGTCGGCGCGACCACGCTCGACGAG

TACCGCGAGCGCATCGAGAAGGACCCCGCCCTGGAGCGCCGCTTCCAGCAGGTGCTGGTCGCCGAGCCGTCCGTCGAGGA

CACCATCGCGATCCTGCGCGGCCTCAAGGGCCGTTACGAGGCCCACCACAAGGTGCAGATCGCGGACTCGGCGCTGGTGG

CCGCCGCGACCCTCTCCGACCGCTACATCACCTCCCGCTTCCTCCCCGACAAGGCCATCGACCTGGTCGACGAGGCCGCG

TCCCGGCTGCGGATGGAGATCGACTCCTCGCCCCTGGAGATCGACGAACTCCAGCGCTCCGTCGACCGGTTGCGCATGGA

GGAGCTGGCGCTGAAGAACGAGTCCGACGCCGCGTCCAAGGAGCGCCTGGCGAAGCTGCGCCGCGACCTCGCCGACCGGG

AGGAGGAGCTGCGCGGACTCAACGCCCGCTGGGAGAAGGAGAAGCAGGGCCTCAACCGGGTCGGTGAGCTCAAGGAGCGC

CTCGACGAGCTGCGCGGCCAGGCCGAACGCGCCCAGCGCGACGGCGACTTCGACGCCGCCTCCAAGCTGCTGTACGGGGA

GATCCCGGGCCTGGAGAGGGAGCTGGAAGAGGCCGCGGAAGCGGAGCAGGAGGCGTCCAAGGACAAGGACACCATGGTCA

AGGAGGAGGTCGGGCCGGACGACATCGCGGACGTCGTCGGCGCCTGGACCGGCATTCCGGCCGGCCGGCTGCTGGAGGGC

GAGACCCAGAAGCTGCTGCGGATGGAGAGCGAACTCGGCAAGCGGCTGATCGGGCAGACCGAGGCCGTGCAGGCCGTCTC

CGACGCCGTACGCCGGACCAGGGCGGGCATCGCCGACCCCGACCGGCCCACCGGGTCGTTCCTCTTCCTCGGGCCCACCG

GCGTCGGCAAGACCGAGCTGGCCAAGGCGCTCGCGGACTTCCTGTTCGACGACGAGCGGGCCATGATCCGCATCGACATG

AGCGAGTACGGCGAGAAGCACAGCGTCGCCCGCCTCGTCGGCGCCCCGCCCGGTTACGTCGGGTACGAGGAGGGCGGCCA

GCTCACCGAGGCCGTCCGCCGCCGCCCGTACAGCGTCGTGCTCCTGGACGAGGTGGAGAAGGCCCACCCCGAGGTCTTCG

ACATCCTGCTCCAGGTCCTCGACGACGGCCGGCTCACCGACGGTCAGGGCCGCACGGTCGACTTCCGCAACTCCATCCTG

ATCCTCACCTCCAACCTCGGCTCCCAGTTCCTGATGGACCCCCTGGTCAAGCCCGAGGTGAAGAAGCAGCAGGTGCTGGA

CGTGGTGCGGGCGTCGTTCAAGCCGGAGTTCATCAACCGGCTCGACGACCTCGTGGTCTTCTCCGCCCTCTCCGGCGACG

AGCTCGCGCACATCGCCGGGCTCCAGATCGACCGTCTCGCGGCCCGGCTGGCCGACCGGCGGCTCACCCTCGACGTCACA

CCCGAGGCGCTGGCCTGGCTCGCCCAGGAGGGCAACGACCCGGCCTACGGGGCCCGGCCGCTGCGCCGGCTCATCCAGAC

CGCGATCGGCGACCGGCTCGCCAAGGAGATCCTGTCCGGCGAGGTCCGCGACGGTGACACCGTACGGGTGGACCGGGCCG

AGGACGGACTGATCGTCGGCCCCGCCTCGTAA