Detailed information NTG0081545

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8775_RS10650
• Genome accession: NZ_AP026915
• Coordinates: 2041471..2042568 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266667.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700005
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2036471..2047568

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8775_RS10625 (PC0005_20540)	pgsA	2036965..2037510 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8775_RS10630 (PC0005_20550)	rodZ	2037521..2038342 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8775_RS10635 (PC0005_20560)	yfmH	2038384..2039694 (-)	1311	WP_317680936.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8775_RS10640 (PC0005_20570)	yfmF	2039691..2040941 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8775_RS10645 (PC0005_20580)	yaaA	2041100..2041468 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
R8775_RS10650 (PC0005_20590)	recF	2041471..2042568 (+)	1098	WP_000266667.1	DNA replication/repair protein RecF	Machinery gene
R8775_RS10655 (PC0005_20600)	guaB	2042619..2044097 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
R8775_RS10660 (PC0005_20610)	trpS	2044249..2045274 (-)	1026	WP_317680937.1	tryptophan--tRNA ligase	-
R8775_RS10665 (PC0005_20620)	-	2045480..2047102 (+)	1623	WP_000958760.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41944.01 Da
• Isoelectric Point: 8.6746

>NTDB_id=81545 R8775_RS10650 WP_000266667.1 2041471..2042568(+) (recF) [Streptococcus pneumoniae strain PZ900700005]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=81545 R8775_RS10650 WP_000266667.1 2041471..2042568(+) (recF) [Streptococcus pneumoniae strain PZ900700005]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAAGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46