Detailed information NTG0815328

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: R0492_RS05925
• Genome accession: NZ_CP136649
• Coordinates: 1153861..1154979 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain NXU98
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1148861..1159979

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R0492_RS05900	-	1149061..1150566 (+)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-
R0492_RS05905	-	1150648..1151859 (-)	1212	WP_085059314.1	cation:proton antiporter	-
R0492_RS05910	-	1151866..1152363 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
R0492_RS05915	-	1152428..1152757 (-)	330	WP_016886161.1	hypothetical protein	-
R0492_RS05920	-	1152958..1153734 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
R0492_RS05925	rapC	1153861..1154979 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
R0492_RS05930	-	1154969..1155106 (+)	138	WP_016886158.1	hypothetical protein	-
R0492_RS05935	-	1155111..1155389 (+)	279	WP_003180226.1	hypothetical protein	-
R0492_RS05940	-	1155464..1155649 (-)	186	WP_003180228.1	YhzD family protein	-
R0492_RS05945	-	1155767..1156663 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
R0492_RS05950	-	1156656..1157924 (+)	1269	WP_016886156.1	ABC transporter permease	-
R0492_RS05955	-	1158044..1159270 (+)	1227	WP_009328954.1	DNA repair exonuclease	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=815328 R0492_RS05925 WP_009328956.1 1153861..1154979(+) (rapC) [Bacillus licheniformis strain NXU98]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=815328 R0492_RS05925 WP_009328956.1 1153861..1154979(+) (rapC) [Bacillus licheniformis strain NXU98]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374