Detailed information NTG0815149

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: RZE83_RS44115
• Genome accession: NZ_CP136588
• Coordinates: 9223826..9225691 (-)
• Length: 621 a.a.
• NCBI ID: WP_039155469.1
• Uniprot ID: -
• Organism: Bradyrhizobium japonicum strain CNPSo 17
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 9218826..9230691

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RZE83_RS44095 (RZE83_44080)	-	9220055..9220615 (-)	561	WP_039155475.1	carboxymuconolactone decarboxylase family protein	-
RZE83_RS44100 (RZE83_44085)	-	9220727..9221890 (-)	1164	WP_039155473.1	PLP-dependent cysteine synthase family protein	-
RZE83_RS44105 (RZE83_44090)	-	9221997..9222461 (-)	465	WP_038959792.1	Lrp/AsnC family transcriptional regulator	-
RZE83_RS44110 (RZE83_44095)	-	9222625..9223638 (+)	1014	WP_039155471.1	1-aminocyclopropane-1-carboxylate deaminase	-
RZE83_RS44115 (RZE83_44100)	recQ	9223826..9225691 (-)	1866	WP_039155469.1	DNA helicase RecQ	Machinery gene
RZE83_RS44120 (RZE83_44105)	-	9225963..9226706 (-)	744	WP_038934348.1	polysaccharide deacetylase family protein	-
RZE83_RS44125 (RZE83_44110)	-	9226810..9227811 (-)	1002	WP_039155466.1	homoserine O-succinyltransferase MetA	-
RZE83_RS44130 (RZE83_44115)	-	9227824..9229125 (-)	1302	WP_039155464.1	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein	-

Sequence

Protein

• Length: 621 a.a.
• Molecular weight: 68101.87 Da
• Isoelectric Point: 7.6111

>NTDB_id=815149 RZE83_RS44115 WP_039155469.1 9223826..9225691(-) (recQ) [Bradyrhizobium japonicum strain CNPSo 17]
MSAPSTAPLPAPANGRDALSVLHSVFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSLCYQLPSLLREGCGIVVSPLI
ALMRDQVAGLLEAGVNAAALNSSLTLQEASDIERRLIAGDLDLLYVAPERLVTPRCLSLLAQAKVALFAIDEAHCVSQWG
HDFRPEYVGLSIIAERFPNVPRIALTATADELTRKEIVERLRLVDSPQFVSSFDRPNIRYEIVDKRNAVSQLKEFIRERH
AGDAGVVYCLSRNRVEEVAAALDDAGIAALPYHAGLDSSIRSRNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAHLDLP
KSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDESSGSDDFKRVSIGKLDALVGLAETAQCRRKRLLAYFGEAE
TAHNCGNCDNCLTPPKMRDGKVLAQKLLSCAYRTGQRFGAMQLIDVLIGRLTEKVTQFGHDKLSVFGIGRELNEKQWRTV
LRQLVAMGHLYSDSEAFGALKLTESARGVLRGETEVWLREEAPGTRVRASRAKSRRGDLAPAANAPQGDVDPELRARLRS
WRSDIARERGVPAYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYGDELLQIVKTR

Nucleotide

• Length: 1866 bp

>NTDB_id=815149 RZE83_RS44115 WP_039155469.1 9223826..9225691(-) (recQ) [Bradyrhizobium japonicum strain CNPSo 17]
ATGTCCGCTCCCTCCACCGCCCCGCTGCCTGCGCCGGCCAACGGCCGCGACGCGCTGTCGGTGCTGCATTCGGTGTTCGG
CCTGCCGGGGTTCCGCGGCGCGCAGGGCGAGATCATCCGGCACGTCACGGATGGCGGCAATTGCCTGGTCTTGATGCCGA
CCGGCGGCGGCAAGTCGCTGTGCTATCAATTGCCGTCACTGCTGCGCGAAGGCTGCGGCATCGTGGTGTCGCCGCTGATC
GCGCTGATGCGCGACCAGGTCGCCGGCCTGCTCGAGGCCGGGGTCAACGCCGCGGCGCTGAACTCGTCGCTGACGCTGCA
GGAAGCTTCCGACATCGAGCGCCGCCTGATCGCGGGTGATCTCGACCTGCTCTATGTCGCGCCGGAACGGCTGGTGACGC
CGCGCTGCCTGTCGCTGCTGGCGCAGGCGAAGGTCGCGCTTTTCGCGATCGACGAGGCGCATTGCGTCTCGCAATGGGGC
CATGACTTCCGCCCCGAATATGTCGGCCTCTCCATCATCGCCGAACGTTTTCCGAACGTTCCGCGCATCGCGCTGACCGC
GACCGCCGACGAGCTGACGCGCAAGGAGATCGTCGAGCGCCTCCGGCTCGTCGACAGCCCGCAATTCGTCTCCAGCTTCG
ATCGCCCGAATATCCGCTACGAGATCGTCGACAAGCGCAACGCGGTGTCGCAGCTGAAAGAATTCATCCGGGAGCGGCAT
GCGGGCGACGCCGGCGTGGTCTATTGCCTGTCGCGCAATCGCGTCGAGGAGGTTGCCGCCGCGCTCGACGACGCCGGCAT
TGCGGCGCTGCCCTATCACGCCGGGCTCGACAGCAGCATACGCTCGCGCAACCAGGACCGGTTCCTCAACGAGGACGGCA
TCGTCATCGTCGCGACCATCGCCTTCGGCATGGGCATCGACAAGCCGGACGTGCGCTTCGTCGCCCATCTCGATCTGCCC
AAGAGCATCGAGGCCTATTATCAGGAGACGGGGCGCGCCGGCCGCGACGGCAAGCCGTCGGCGGCCTGGATGGCCTATGG
TCTTTCCGACATCGTGCAGCAGCGGCGCATGATCGACGAGTCCAGCGGTTCTGACGATTTCAAGCGGGTGTCGATCGGCA
AGCTCGACGCACTGGTCGGCCTCGCCGAGACCGCGCAGTGCCGGCGCAAGCGGCTGCTCGCCTATTTCGGCGAGGCGGAG
ACGGCGCACAATTGCGGCAATTGCGACAACTGCCTGACGCCGCCCAAGATGCGCGACGGCAAGGTGCTGGCGCAGAAGCT
GCTGTCCTGCGCCTATCGCACCGGGCAGCGTTTCGGTGCGATGCAGCTGATCGACGTGCTGATTGGTCGCCTTACCGAGA
AGGTGACGCAGTTCGGCCACGACAAATTGTCCGTGTTCGGCATCGGGCGCGAGCTGAACGAGAAGCAGTGGCGCACGGTG
TTGCGGCAGCTGGTGGCGATGGGGCATTTGTACAGCGACAGCGAGGCGTTCGGCGCGCTGAAGCTGACGGAGAGCGCGCG
CGGCGTGCTACGCGGCGAGACCGAGGTGTGGCTGCGCGAGGAAGCGCCGGGCACGCGTGTTCGCGCGAGCCGGGCGAAAT
CCCGCCGTGGTGACCTCGCGCCTGCGGCCAACGCGCCGCAGGGCGATGTCGATCCCGAATTGCGGGCGCGGCTGAGGTCC
TGGCGTTCGGACATCGCGCGCGAACGCGGCGTGCCGGCCTATGTCGTGCTGCACGATGCCACCATCGACGGCATCGTCCG
GGCCTGGCCAACGACGCTGGACGAGCTCCGCAACGTGCCCGGCATCGGCGACAAGAAGCTCGAGCATTACGGCGACGAGC
TGCTTCAGATCGTCAAGACGCGGTAG

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (34-190)

• HRDC domain (HRDC) (553-618)

• RQC domain (RQC) (414-522)

• RecQ zinc-binding (RecQ_Zn_bind) (349-412)

• Helicase conserved C-terminal domain (Helicase_C) (229-336)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	37.851	97.424	0.369