Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QA442_RS17910 Genome accession   NZ_CP121861
Coordinates   3416328..3417119 (-) Length   263 a.a.
NCBI ID   WP_069149210.1    Uniprot ID   -
Organism   Bacillus stercoris strain Mal05     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3411328..3422119
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QA442_RS17875 (QA442_17875) ephM 3412189..3413049 (-) 861 WP_014663271.1 epoxide hydrolase EphM -
  QA442_RS17880 (QA442_17880) - 3413036..3413368 (-) 333 WP_040083673.1 SdpI family protein -
  QA442_RS17885 (QA442_17885) - 3413452..3413970 (-) 519 WP_095432292.1 SH3 domain-containing protein -
  QA442_RS17890 (QA442_17890) - 3414089..3414358 (-) 270 WP_014663267.1 YfhJ family protein -
  QA442_RS17895 (QA442_17895) - 3414483..3414635 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  QA442_RS17900 (QA442_17900) - 3414667..3415860 (-) 1194 WP_080488038.1 MFS transporter -
  QA442_RS17905 (QA442_17905) - 3416005..3416319 (-) 315 WP_014476208.1 YfhH family protein -
  QA442_RS17910 (QA442_17910) recX 3416328..3417119 (-) 792 WP_069149210.1 recombination regulator RecX Regulator
  QA442_RS17915 (QA442_17915) - 3417208..3418119 (+) 912 WP_071581296.1 TIGR01777 family oxidoreductase -
  QA442_RS17920 (QA442_17920) - 3418174..3418284 (+) 111 WP_003223230.1 YfhE family protein -
  QA442_RS17925 (QA442_17925) - 3418351..3418542 (+) 192 WP_014663262.1 YfhD family protein -
  QA442_RS17930 (QA442_17930) - 3418580..3419164 (-) 585 WP_071581295.1 nitroreductase -
  QA442_RS17935 (QA442_17935) - 3419252..3420133 (-) 882 WP_071581294.1 PhzF family phenazine biosynthesis isomerase -
  QA442_RS17940 (QA442_17940) - 3420248..3421279 (-) 1032 WP_095432293.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30863.09 Da        Isoelectric Point: 6.6692

>NTDB_id=814935 QA442_RS17910 WP_069149210.1 3416328..3417119(-) (recX) [Bacillus stercoris strain Mal05]
MPFITKISAQKKNTERFNIFLDDKYAFSVDADVLVKYELKKGKELDDLDIIEIQYGDEVKKGFNRALEFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVINAALEQIEYENDEDTEKEALRIQAEKALRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLHEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=814935 QA442_RS17910 WP_069149210.1 3416328..3417119(-) (recX) [Bacillus stercoris strain Mal05]
ATGCCGTTTATTACAAAAATATCAGCGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTTGTGAAATATGAGCTCAAGAAGGGAAAAGAACTTGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGCGCGCTTGAATTTTTATCCTATCGAATGCGGTCAACGAAAGAGGTC
GAGGACCACTTGAAGAAAAAAGAAACCTCGCCACCCGTCATTGCGGAGGTCATCCATAAGCTCAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACCCACAAAAAAACAAACGGAAAAGGACCTGATGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCTTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAAGGCTTCTCATTTGATGTCATCAATGCGGCGCTAGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCATTCAAGCAGAAAAAGCGCTTAGAAAATACCGCTATGACGGCTCCTATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAACAATTTCTGCACGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

95.057

100

0.951