Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QA442_RS14885 Genome accession   NZ_CP121861
Coordinates   2866913..2867377 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus stercoris strain Mal05     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2861913..2872377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QA442_RS14865 (QA442_14865) fadH 2863100..2863864 (-) 765 WP_071580635.1 2,4-dienoyl-CoA reductase -
  QA442_RS14870 (QA442_14870) - 2864008..2864868 (+) 861 WP_071580634.1 metallophosphoesterase -
  QA442_RS14875 (QA442_14875) - 2864926..2865420 (+) 495 WP_080488100.1 L,D-transpeptidase family protein -
  QA442_RS14880 (QA442_14880) - 2865496..2866788 (+) 1293 WP_071580632.1 MFS transporter -
  QA442_RS14885 (QA442_14885) kre 2866913..2867377 (+) 465 WP_003232406.1 YkyB family protein Regulator
  QA442_RS14890 (QA442_14890) cheV 2867421..2868332 (-) 912 WP_071580630.1 chemotaxis protein CheV -
  QA442_RS14895 (QA442_14895) - 2868537..2868698 (+) 162 WP_003245246.1 hypothetical protein -
  QA442_RS14900 (QA442_14900) - 2868900..2870081 (+) 1182 WP_069838855.1 aminotransferase A -
  QA442_RS14905 (QA442_14905) kinA 2870092..2871912 (-) 1821 Protein_2912 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=814919 QA442_RS14885 WP_003232406.1 2866913..2867377(+) (kre) [Bacillus stercoris strain Mal05]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=814919 QA442_RS14885 WP_003232406.1 2866913..2867377(+) (kre) [Bacillus stercoris strain Mal05]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGTGCTTTGCAAAAGCTCGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTGTTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CTAATCGCCAGCAGCCAGCTTATCACAAACCTGTCTTTAAAAAGCTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1