Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QA442_RS14785 Genome accession   NZ_CP121861
Coordinates   2850918..2851502 (-) Length   194 a.a.
NCBI ID   WP_014663802.1    Uniprot ID   -
Organism   Bacillus stercoris strain Mal05     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2845918..2856502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QA442_RS14760 (QA442_14760) mobB 2846319..2846840 (-) 522 WP_069149525.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QA442_RS14765 (QA442_14765) glp 2846801..2848093 (-) 1293 WP_095431405.1 gephyrin-like molybdotransferase Glp -
  QA442_RS14770 (QA442_14770) - 2848111..2849130 (-) 1020 WP_095431406.1 molybdopterin-synthase adenylyltransferase MoeB -
  QA442_RS14775 (QA442_14775) - 2849181..2849780 (-) 600 WP_040083273.1 molybdenum cofactor guanylyltransferase -
  QA442_RS14780 (QA442_14780) cse15 2849916..2850878 (+) 963 WP_095431407.1 spore protein Cse15 -
  QA442_RS14785 (QA442_14785) rok 2850918..2851502 (-) 585 WP_014663802.1 transcriptional regulator Rok Regulator
  QA442_RS14790 (QA442_14790) ykuV 2851951..2852409 (-) 459 WP_069838844.1 thiol-disulfide oxidoreductase YkuV -
  QA442_RS14795 (QA442_14795) ahpA 2852476..2853018 (-) 543 WP_014663800.1 biofilm-specific peroxidase AhpA -
  QA442_RS14800 (QA442_14800) mscT 2853254..2854057 (+) 804 WP_071580642.1 small-conductance mechanosensitive channel protein MscT -
  QA442_RS14805 (QA442_14805) - 2854093..2854338 (-) 246 WP_003232382.1 YkuS family protein -
  QA442_RS14810 (QA442_14810) - 2854400..2855524 (-) 1125 WP_071580641.1 N-acetyldiaminopimelate deacetylase -
  QA442_RS14815 (QA442_14815) dapD 2855594..2856304 (-) 711 WP_014663797.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22141.15 Da        Isoelectric Point: 9.7036

>NTDB_id=814918 QA442_RS14785 WP_014663802.1 2850918..2851502(-) (rok) [Bacillus stercoris strain Mal05]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIETAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=814918 QA442_RS14785 WP_014663802.1 2850918..2851502(-) (rok) [Bacillus stercoris strain Mal05]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCTGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTGCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCATAACGCGG
CGATTAAAAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTACATTTTAGAAGGTGAAATCGAAACTGCAGA
ATCAGCTGAATCTGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

99.471

97.423

0.969