Detailed information NTG0814876

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QA442_RS02600
• Genome accession: NZ_CP121861
• Coordinates: 498162..499307 (-)
• Length: 381 a.a.
• NCBI ID: WP_095432268.1
• Uniprot ID: -
• Organism: Bacillus stercoris strain Mal05
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 493162..504307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA442_RS02575 (QA442_02575)	-	493416..495491 (-)	2076	WP_095432271.1	transglycosylase domain-containing protein	-
QA442_RS02580 (QA442_02580)	speE	495693..496523 (+)	831	WP_003227543.1	spermidine synthase	-
QA442_RS02585 (QA442_02585)	speB	496584..497456 (+)	873	WP_095432270.1	agmatinase	-
QA442_RS02590 (QA442_02590)	-	497488..497961 (-)	474	WP_095432269.1	YbaK/EbsC family protein	-
QA442_RS02595 (QA442_02595)	-	498059..498178 (-)	120	WP_014665774.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
QA442_RS02600 (QA442_02600)	rapF	498162..499307 (-)	1146	WP_095432268.1	tetratricopeptide repeat protein	Regulator
QA442_RS02605 (QA442_02605)	-	499537..500892 (+)	1356	WP_095432266.1	YncE family protein	-
QA442_RS02610 (QA442_02610)	-	500932..502308 (+)	1377	WP_095432265.1	YncE family protein	-
QA442_RS02615 (QA442_02615)	-	502314..503015 (-)	702	WP_095432264.1	bacteriocin biosynthesis protein AlbG	-
QA442_RS02620 (QA442_02620)	-	503012..504292 (-)	1281	WP_095432263.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45563.21 Da
• Isoelectric Point: 5.0684

>NTDB_id=814876 QA442_RS02600 WP_095432268.1 498162..499307(-) (rapF) [Bacillus stercoris strain Mal05]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDRREYVLAIQFFKKAESKLVFVKDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYSEQTTYDIRMIQCQSLFGANFLDLKQYEKAITHFQKAFTLAKAEQQPQLMGRTLYNIALCKQNQNSFES
AIEYVKKSIQVFEGSKMLPSLPQAFFLITQIYFKLGKIDNACEYHKKGKEYSAAAGDTVYLTEFEFLESLYLSGPDEERI
EKCFVFLEGKMMYADIEDFALDVAKYYHQQENYKKASHYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=814876 QA442_RS02600 WP_095432268.1 498162..499307(-) (rapF) [Bacillus stercoris strain Mal05]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGACCAAGACCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTACTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCGCCGTGAATATGTATTAGCCATTCAATTCTTTAAAAAAGCTGAGAGCAAGCTGGTTTTTG
TGAAAGACAAAATCGATAAAGCGGAATTCTTTTTCAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTCTCC
ATGGACTATGCACGTCAAGCATTCGAAATATACAGTGAACAGACTACATATGATATCAGAATGATTCAATGTCAGTCCTT
ATTCGGAGCCAACTTTTTGGATTTAAAACAATACGAAAAAGCAATTACCCATTTTCAAAAAGCCTTTACACTTGCAAAAG
CAGAGCAGCAGCCGCAATTAATGGGAAGAACTCTTTATAACATAGCACTCTGCAAGCAAAACCAAAACAGTTTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCAAGTATTTGAAGGATCTAAAATGCTCCCTTCACTGCCACAAGCTTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGTAAGATTGATAACGCCTGTGAATATCATAAAAAAGGAAAGGAGTATTCTGCAG
CCGCGGGAGATACCGTGTATCTAACGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCGGATGAGGAACGGATA
GAAAAATGTTTTGTTTTTCTTGAAGGTAAAATGATGTATGCAGATATCGAGGACTTCGCACTTGATGTTGCTAAATATTA
TCATCAACAGGAAAATTACAAAAAAGCATCTCATTACTTTTTAAAGGTTGAAGAAGCAAGGCAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (263-290)

• Tetratricopeptide repeat (TPR_12) (189-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	80.052	100	0.801
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572