NTDB

Overview

Name	comM	Type	Machinery gene
Locus tag	QBS17_RS00175	Genome accession	NZ_CP121849
Coordinates	38042..39556 (-)	Length	504 a.a.
NCBI ID	WP_100647101.1	Uniprot ID	-
Organism	Aeromonas veronii strain ANYA 14386
Function	ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 33042..44556

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QBS17_RS00150	-	34259..34894 (-)	636	WP_005357452.1	nicotinamidase	-
QBS17_RS00155	-	34969..35619 (+)	651	WP_201913387.1	DNA mismatch repair protein MutT	-
QBS17_RS00160	-	35616..36119 (+)	504	WP_201913385.1	DUF523 domain-containing protein	-
QBS17_RS00165	-	36044..37009 (-)	966	WP_201913383.1	acyltransferase	-
QBS17_RS00170	-	37016..37915 (-)	900	WP_005339610.1	acyltransferase	-
QBS17_RS00175	comM	38042..39556 (-)	1515	WP_100647101.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
QBS17_RS00180	ilvG	39941..41587 (+)	1647	WP_201913381.1	acetolactate synthase 2 catalytic subunit	-
QBS17_RS00185	ilvM	41584..41862 (+)	279	WP_005342011.1	acetolactate synthase 2 small subunit	-
QBS17_RS00190	-	41875..42819 (+)	945	WP_111900975.1	branched-chain amino acid transaminase	-

Sequence

Protein

Download Length: 504 a.a. Molecular weight: 54579.47 Da Isoelectric Point: 7.4493

                                >NTDB_id=814732 QBS17_RS00175 WP_100647101.1 38042..39556(-) (comM) [Aeromonas veronii strain ANYA 14386]

MSLAVVYSRASLGIAAPQVTVEVHLSNGLPAFNMVGLPETSVKESRDRVRSALLNGNFEFPSKHITVNLAPADLPKEGGR

FDLAIAIGILAASKQIPAKYLLDHEFLGELALTGEIRPVLGVLPAVLACRDAGRTLLVPRENGPEASLIQDAEVRTAHQL

LAVTAWLAGQYELPLPDPQSAESLPDVPDLQDVIGQSQAKRALEIAAAGSHNLLFIGPPGTGKSMLASRLPGILPPLSEQ

EAQQTAAIHSIGGLTPRAGHWHHRPYRTPHHSASAVALVGGGSHPRPGEISLAHNGVLFLDELPEFERKVLDSLREPLET

GHITISRAARQVDFPARFQLVGAMNPSPCGHYGDGQTRSSPDQILRYLGKLSGPFLDRFDLTVEVPLLPKGSLTGKAERG

ESSQQIRDRVLAARERMLSRNGKLNNLLDSREIEDICRLSPQDAEFLENAIQKLGLSIRAWHRILRVSRTIADLAGQPAI

GKEHLIEALGYRAMDRLLSRLRSS

Nucleotide

Download Length: 1515 bp

                                >NTDB_id=814732 QBS17_RS00175 WP_100647101.1 38042..39556(-) (comM) [Aeromonas veronii strain ANYA 14386]

ATGTCATTAGCTGTGGTTTATAGCCGTGCCAGCCTCGGGATCGCGGCCCCGCAAGTTACAGTGGAAGTTCACCTCTCCAA

CGGCCTGCCCGCCTTCAATATGGTCGGCCTGCCGGAAACCTCGGTGAAAGAGTCGCGGGATCGGGTGCGCAGCGCCCTGC

TCAACGGCAATTTCGAGTTCCCGAGCAAACACATCACCGTCAATCTGGCCCCCGCCGACCTACCCAAGGAGGGAGGCCGT

TTCGATCTGGCCATCGCCATCGGCATTCTTGCCGCTTCCAAGCAGATACCTGCAAAATATCTGCTCGATCATGAATTTTT

AGGGGAATTGGCCCTGACCGGAGAGATCCGCCCTGTGCTCGGGGTGCTGCCCGCCGTGCTCGCCTGCCGGGATGCGGGGC

GCACCCTGCTGGTACCGCGAGAGAACGGCCCGGAAGCCTCTCTCATTCAGGATGCCGAGGTGCGCACCGCCCACCAACTG

CTGGCCGTCACCGCTTGGCTGGCAGGCCAATACGAGCTGCCGCTGCCGGATCCCCAAAGCGCGGAGAGCCTGCCCGATGT

ACCGGATCTGCAGGATGTGATCGGCCAGTCTCAGGCCAAGCGGGCGCTGGAGATCGCCGCCGCCGGCAGTCACAACCTGC

TGTTCATCGGCCCGCCCGGCACCGGCAAGAGCATGCTGGCGAGCCGTCTGCCCGGCATCTTGCCGCCGCTGAGCGAGCAG

GAGGCGCAGCAGACCGCCGCCATCCACTCCATCGGCGGCCTCACCCCGCGCGCCGGTCACTGGCACCACAGACCCTATCG

CACGCCCCACCACAGTGCCTCAGCGGTGGCGCTGGTGGGCGGTGGCAGCCACCCGCGGCCCGGCGAAATTTCGCTGGCCC

ACAACGGGGTGCTGTTTCTCGACGAGCTGCCCGAATTCGAGCGCAAGGTGCTCGACTCCCTGCGCGAGCCGCTGGAGACG

GGCCACATCACCATCAGCCGGGCCGCCCGTCAGGTGGATTTTCCCGCCCGCTTCCAGCTGGTCGGCGCCATGAATCCCAG

CCCCTGCGGCCACTATGGTGACGGCCAGACCCGCTCCAGCCCGGATCAGATCTTGCGCTACCTCGGCAAGCTCTCCGGCC

CCTTTCTCGACCGCTTCGATCTGACGGTGGAAGTGCCACTGCTACCCAAGGGGAGCCTGACCGGCAAGGCGGAGCGGGGG

GAGTCTAGTCAGCAGATCCGCGATCGAGTGCTGGCGGCACGGGAGCGCATGCTGAGCCGCAACGGTAAGCTCAACAACCT

GCTGGATAGCCGTGAGATAGAGGATATTTGCCGCTTATCGCCGCAAGATGCCGAATTTTTGGAGAATGCCATCCAGAAGC

TGGGGCTCAGCATCCGGGCCTGGCATCGCATCCTGCGGGTGTCACGCACCATCGCCGATCTGGCCGGACAACCCGCCATC

GGCAAGGAGCATCTTATCGAGGCACTCGGTTACAGGGCCATGGACAGGCTGCTGTCGCGACTGCGCAGCAGTTGA

Domains

Predicted by InterproScan.

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(400-492)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(189-390)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comM	Vibrio cholerae strain A1552	63.347	99.603	0.631
comM	Haemophilus influenzae Rd KW20	61.66	100	0.619
comM	Vibrio campbellii strain DS40M4	62.151	99.603	0.619
comM	Glaesserella parasuis strain SC1401	60.947	100	0.613
comM	Legionella pneumophila str. Paris	50.992	100	0.51
comM	Legionella pneumophila strain ERS1305867	50.992	100	0.51
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.245	100	0.464

Detailed information NTG0814732