Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QBE03_RS07610 Genome accession   NZ_CP121698
Coordinates   1746418..1746819 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas sacchari strain DJ16     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1741418..1751819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QBE03_RS07600 - 1744347..1745228 (-) 882 WP_017910261.1 energy transducer TonB -
  QBE03_RS07605 gshB 1745225..1746175 (-) 951 WP_017910262.1 glutathione synthase -
  QBE03_RS07610 pilG 1746418..1746819 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  QBE03_RS07615 - 1746837..1747199 (+) 363 WP_026144622.1 response regulator -
  QBE03_RS07620 - 1747201..1747731 (+) 531 WP_017914762.1 chemotaxis protein CheW -
  QBE03_RS07625 - 1747772..1749808 (+) 2037 WP_017910265.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=814002 QBE03_RS07610 WP_003472648.1 1746418..1746819(+) (pilG) [Xanthomonas sacchari strain DJ16]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=814002 QBE03_RS07610 WP_003472648.1 1746418..1746819(+) (pilG) [Xanthomonas sacchari strain DJ16]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGCTTGCGGGTCATGGTGATTGACGATTCGAAAACGATCCGTCG
TACTGCCGAAACGTTGCTGAAGCGCGAAGGGTGCGAAGTGGTGACGGCGACCGACGGCTTCGAGGCGCTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGGTCCGAGCAGTACCTCACCAAACCCTTTACACGCGAAGAGCTGCTGGGCGCGATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677