Detailed information NTG0813963

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: RW107_RS01610
• Genome accession: NZ_CP136257
• Coordinates: 291002..292123 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain A9
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 286002..297123

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RW107_RS01585 (RW107_01585)	ycdA	286007..287071 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
RW107_RS01590 (RW107_01590)	-	287094..287225 (-)	132	WP_003246334.1	hypothetical protein	-
RW107_RS01595 (RW107_01595)	ycdB	287399..288820 (+)	1422	WP_128441328.1	YcdB/YcdC domain-containing protein	-
RW107_RS01600 (RW107_01600)	ycdC	289007..290368 (+)	1362	WP_128442059.1	YcdB/YcdC domain-containing protein	-
RW107_RS01605 (RW107_01605)	cwlK	290376..290879 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
RW107_RS01610 (RW107_01610)	rapF	291002..292123 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
RW107_RS01615 (RW107_01615)	ycdF	292230..293006 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
RW107_RS01620 (RW107_01620)	ycdG	293031..294716 (+)	1686	WP_128441330.1	alpha-glucosidase	-
RW107_RS01625 (RW107_01625)	znuA	294904..295863 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
RW107_RS01630 (RW107_01630)	znuC	295918..296613 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=813963 RW107_RS01610 WP_015715201.1 291002..292123(+) (rapF) [Bacillus subtilis strain A9]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=813963 RW107_RS01610 WP_015715201.1 291002..292123(+) (rapF) [Bacillus subtilis strain A9]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAGAAGCTCGAGTATGTTGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCATATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATATGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405