Detailed information NTG0813935

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: P8603_RS04825
• Genome accession: NZ_CP121693
• Coordinates: 1038306..1039421 (+)
• Length: 371 a.a.
• NCBI ID: WP_160224123.1
• Uniprot ID: A0A6P1QWZ6
• Organism: Bergeyella cardium strain BC
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1033306..1044421

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P8603_RS04785 (P8603_04785)	-	1033440..1034348 (+)	909	WP_160224117.1	GYDIA family GHMP kinase	-
P8603_RS04790 (P8603_04790)	-	1034515..1034841 (+)	327	WP_160224118.1	hypothetical protein	-
P8603_RS04795 (P8603_04795)	-	1034853..1035053 (+)	201	WP_160224119.1	hypothetical protein	-
P8603_RS04800 (P8603_04800)	-	1035350..1035691 (+)	342	WP_160224120.1	hypothetical protein	-
P8603_RS04805 (P8603_04805)	-	1035801..1036169 (+)	369	WP_120489817.1	hypothetical protein	-
P8603_RS04810 (P8603_04810)	-	1036179..1037162 (+)	984	WP_160224121.1	aminoglycoside phosphotransferase family protein	-
P8603_RS04815 (P8603_04815)	-	1037165..1037569 (+)	405	WP_120489815.1	RNase adapter RapZ	-
P8603_RS04820 (P8603_04820)	-	1037581..1038294 (+)	714	WP_160224122.1	sugar phosphate nucleotidyltransferase	-
P8603_RS04825 (P8603_04825)	dprA	1038306..1039421 (+)	1116	WP_160224123.1	DNA-processing protein DprA	Machinery gene
P8603_RS04830 (P8603_04830)	gdhA	1039611..1040970 (+)	1360	Protein_941	NADP-specific glutamate dehydrogenase	-
P8603_RS04835 (P8603_04835)	-	1041139..1043280 (-)	2142	WP_160224124.1	S46 family peptidase	-
P8603_RS04840 (P8603_04840)	-	1043435..1043569 (+)	135	WP_160224125.1	DUF4469 domain-containing protein	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 41219.03 Da
• Isoelectric Point: 7.0075

>NTDB_id=813935 P8603_RS04825 WP_160224123.1 1038306..1039421(+) (dprA) [Bergeyella cardium strain BC]
MFSEEHLYSIALRSCKNIGDANFRKLINAFGSASSVWNADKRQLTKVYGISQGMISEIGSSEHLDFAKRELDFCEKNNIQ
ILLRHSGELPFFLDDCIDAPAILYKKGAINENLIPVSIVGTRNMTAYGKDFIRYFLSITKEMNLLTVSGLAYGVDSEVHQ
QSVGNDVPTVAVLAHGLHTLYPSKNKRLSEQILERCGALITEFNSSHKPDREHFIQRNRIIAGISRNLIVVETAFGGGSI
STATFANGYNREVYALPGRITDKYSQGCNHLIYQNKAGTISSVKTLIDNLGLKVPSEAESTGELFPQKSVKVQLSGMQKT
LYDIIESHPKINLDDLAEKSDLQTYEILPVLLELEILGYIKSFSGRQFAVS

Nucleotide

• Length: 1116 bp

>NTDB_id=813935 P8603_RS04825 WP_160224123.1 1038306..1039421(+) (dprA) [Bergeyella cardium strain BC]
ATGTTTTCGGAAGAGCATCTTTATTCCATCGCCCTACGCTCCTGTAAAAATATAGGAGATGCTAATTTCCGAAAGCTCAT
AAATGCTTTTGGAAGTGCTTCCTCCGTGTGGAATGCAGATAAAAGACAGCTTACAAAAGTCTATGGTATTTCTCAGGGAA
TGATTTCCGAGATAGGCTCATCTGAGCATTTAGACTTTGCAAAGAGGGAATTAGACTTCTGTGAGAAGAATAATATTCAG
ATTCTACTTCGGCACAGTGGTGAGCTCCCTTTTTTCTTAGATGATTGTATAGATGCTCCTGCGATCCTCTATAAAAAAGG
AGCTATCAATGAGAATCTTATACCTGTGAGCATCGTTGGTACCCGCAATATGACGGCTTATGGTAAGGACTTTATAAGAT
ACTTCCTGTCTATCACCAAAGAGATGAACCTCCTTACAGTGAGCGGACTTGCCTATGGTGTAGATTCAGAAGTGCATCAG
CAGTCTGTGGGGAATGATGTACCTACTGTTGCAGTGCTTGCACACGGTCTCCACACTCTTTACCCATCTAAGAATAAGCG
CTTGTCTGAGCAGATATTAGAGCGATGCGGTGCTTTAATTACAGAATTTAATTCTTCCCATAAACCCGACAGGGAGCATT
TCATCCAGAGGAATAGAATTATAGCGGGTATTTCCAGAAACTTAATCGTAGTAGAAACTGCTTTTGGTGGGGGCTCTATC
AGTACGGCGACTTTTGCCAATGGCTATAACAGGGAAGTCTATGCTTTGCCAGGTCGTATCACAGATAAGTACAGTCAAGG
CTGTAATCATCTTATTTATCAGAATAAGGCGGGGACTATTTCCAGTGTTAAAACTCTTATTGATAATCTCGGTTTGAAAG
TCCCATCAGAAGCCGAAAGCACAGGTGAACTCTTCCCTCAGAAATCGGTTAAGGTACAACTCTCAGGAATGCAGAAAACA
CTCTATGATATTATAGAGAGCCACCCTAAAATCAATTTGGATGACCTTGCTGAGAAATCCGATTTACAGACCTATGAAAT
CCTCCCTGTTTTACTTGAACTCGAAATCTTGGGGTATATTAAGTCTTTTTCGGGAAGGCAATTTGCGGTTTCTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-277)

• DprA winged helix domain (DprA_WH) (314-365)

3D structure

• AlphaFold DB: A0A6P1QWZ6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	52.989	99.191	0.526