Detailed information NTG0813896

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: RWA07_RS03340
• Genome accession: NZ_CP136183
• Coordinates: 712837..714285 (+)
• Length: 482 a.a.
• NCBI ID: WP_000778209.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ABO21-A001
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 707837..719285

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RWA07_RS03340 (RWA07_03340)	rpoN/rpoN1	712837..714285 (+)	1449	WP_000778209.1	RNA polymerase factor sigma-54	Machinery gene
RWA07_RS03345 (RWA07_03345)	hpf	714454..714792 (+)	339	WP_002123824.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
RWA07_RS03350 (RWA07_03350)	ibaG	714931..715182 (+)	252	WP_001083680.1	BolA family iron metabolism protein IbaG	-
RWA07_RS03355 (RWA07_03355)	murA	715189..716445 (+)	1257	WP_000357156.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
RWA07_RS03360 (RWA07_03360)	hisG	716445..717128 (+)	684	WP_001000725.1	ATP phosphoribosyltransferase	-
RWA07_RS03365 (RWA07_03365)	hisD	717234..718523 (+)	1290	WP_002123826.1	histidinol dehydrogenase	-

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55108.06 Da
• Isoelectric Point: 4.6890

>NTDB_id=813896 RWA07_RS03340 WP_000778209.1 712837..714285(+) (rpoN/rpoN1) [Acinetobacter baumannii strain ABO21-A001]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLSTLEHKETDDLTTELNADHLP
DDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKEYILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEII
LAVQHLLSEMDIDEEVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYKLLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTTGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=813896 RWA07_RS03340 WP_000778209.1 712837..714285(+) (rpoN/rpoN1) [Acinetobacter baumannii strain ABO21-A001]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAATTCATTATCGTTAACGCCTCAATTGCAGCAGGCAATCCGTTTACTACA
ACTTTCTAGCCTAGAGTTAGAGCAAGAAATCCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTAGAAGATGAAT
CACTAGCAGAAAGTTTATCTACTTTAGAACATAAAGAAACGGATGATCTTACAACAGAGTTGAATGCTGATCACTTACCT
GATGACTTGCCTGTTGATACTGAATGGGATGACATTTATACACATCAATCCACTGCTTTGGGTACTCCTGAGTTCGAAGA
GCGTGAAGATAATCGCCAAGTTCACCTGACGCTTAAAGAATATATTTTGGAGCAAGTGAACTTACTGCATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGCATAGTTGATGCTTTAGATGATAAAGGTTTTCTGGATGCTGAATTAGAAGAGATTATT
TTGGCAGTACAGCATTTATTAAGTGAGATGGATATAGACGAGGAAGTGGAAGAGGATGAAGTTTTAGTAGTCTTAAAACA
TATTCAACGTCTTGATCCAATTGGTATTGGAGCTCGTAATTTAGCTGAATGTTTAAAAGTTCAGTTGGAGTTCTTGCCTA
GAGAAACTGAATATTTGAAAGAAGCTAGAAGTCTACTTCAATATTACAAATTACTGATTGCGAATGATCTTAATAAATTA
TTGAAGCAAACAGGGCTATCCAAAGAACAATTAAAATTTGCAGTTGATTTATTAAAAACATTAAAGCCTTATCCAGGCAT
GGATTTTGAAAAGCAAGAATCAGAGTATCAAATTCCTGACGTAGTCGTTGCCAAGAAGGACTTGCATTGGCAAGTTCAGT
TAAATCCTGATGTGATGCCAAAATTAAGAATCAATTCTTTTTATTCGAGTATGATTCGTAGAGCAGATCAAAGTGATGAT
AATTTATATCTACGTAATCAAATGCTTGAGGCTAAAAATTTTATAAAAAGTATTGATGAACGGCACAAAACATTATTAAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCCGAAGCAATGAAACCCTTAGTACTAAGGG
ATGTTGCAGAAGAAGTAGAATTACATGAGTCGACCGTTTCTCGCGTTACCACAAATAAGTATATGCTTACTCCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCATGTGGGGACAACCACCGGAGGTGAGGCTTCTTCTACCGCAATTCGGGC
TATGATTAAAAAGTTAGTTTCTAATGAAAATCCGCGTAAACCTTTATCTGATAATGCAATTGCTGCTTTATTGAAAGAAG
AGGGAATAGAAGTAGCTAGAAGGACTGTAGCAAAATATAGAGAATCGTTACATATTCCATCGTCATCCGAGAGAAAAGTC
TTGATCTAA

Domains

Predicted by InterProScan.

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, core binding domain (Sigma54_CBD) (111-308)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	43.137	100	0.456