Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QBE57_RS10380 Genome accession   NZ_CP121670
Coordinates   2125927..2126661 (+) Length   244 a.a.
NCBI ID   WP_012027751.1    Uniprot ID   A0A0Z9J9V6
Organism   Streptococcus suis strain HBXY-SL     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2120927..2131661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QBE57_RS10350 - 2121123..2122787 (+) 1665 WP_012028485.1 DAK2 domain-containing protein -
  QBE57_RS10355 tsaE 2122888..2123328 (+) 441 WP_012775330.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  QBE57_RS10360 - 2123321..2123848 (+) 528 WP_012027755.1 GNAT family N-acetyltransferase -
  QBE57_RS10365 - 2123845..2125038 (+) 1194 WP_012027754.1 LCP family protein -
  QBE57_RS10370 - 2125147..2125449 (-) 303 WP_012027753.1 methyl-accepting chemotaxis protein -
  QBE57_RS10375 - 2125451..2125864 (-) 414 WP_012027752.1 HIT family protein -
  QBE57_RS10380 pptA 2125927..2126661 (+) 735 WP_012027751.1 ABC transporter ATP-binding protein Regulator
  QBE57_RS10385 - 2126658..2127698 (+) 1041 WP_012027749.1 ABC transporter permease -
  QBE57_RS10390 ccrZ 2127748..2128542 (+) 795 WP_002942360.1 cell cycle regulator CcrZ -
  QBE57_RS10395 trmB 2128539..2129177 (+) 639 WP_002939002.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QBE57_RS10400 rimP 2129748..2130218 (+) 471 WP_002942369.1 ribosome maturation factor RimP -
  QBE57_RS10405 nusA 2130292..2131434 (+) 1143 WP_004194726.1 transcription termination factor NusA -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26788.09 Da        Isoelectric Point: 4.3999

>NTDB_id=813813 QBE57_RS10380 WP_012027751.1 2125927..2126661(+) (pptA) [Streptococcus suis strain HBXY-SL]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIVIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLGEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=813813 QBE57_RS10380 WP_012027751.1 2125927..2126661(+) (pptA) [Streptococcus suis strain HBXY-SL]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACACCCT
ATCAAGGACAGATTGTAATTGACGGCCTAACTTTGCTACAAGGGGCTGAAAATTATCGGAAGAAAATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGTTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGATTTAATCGCTCTTTTGGGGGAAGAAAAATCTAAGGGCACTTCAATCCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTCCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z9J9V6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.895

97.951

0.734
  pptA Streptococcus thermophilus LMD-9

73.222

97.951

0.717