Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   QBE57_RS02185 Genome accession   NZ_CP121670
Coordinates   432601..433605 (+) Length   334 a.a.
NCBI ID   WP_014636430.1    Uniprot ID   -
Organism   Streptococcus suis strain HBXY-SL     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 427601..438605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QBE57_RS02160 - 428536..429015 (+) 480 WP_014636435.1 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB -
  QBE57_RS02165 - 429031..429816 (+) 786 WP_014636434.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
  QBE57_RS02170 - 429809..430627 (+) 819 WP_014636433.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
  QBE57_RS02175 - 430640..431056 (+) 417 WP_014636432.1 PTS sugar transporter subunit IIA -
  QBE57_RS02180 - 431312..432391 (-) 1080 WP_014636431.1 M24 family metallopeptidase -
  QBE57_RS02185 ccpA 432601..433605 (+) 1005 WP_014636430.1 catabolite control protein A Regulator
  QBE57_RS02190 - 434034..435869 (-) 1836 WP_024417469.1 Spy0128 family protein -
  QBE57_RS02195 - 436179..437177 (+) 999 WP_012027312.1 glycosyltransferase family 4 protein -
  QBE57_RS02200 - 437178..438491 (+) 1314 WP_014636428.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36788.94 Da        Isoelectric Point: 5.5173

>NTDB_id=813768 QBE57_RS02185 WP_014636430.1 432601..433605(+) (ccpA) [Streptococcus suis strain HBXY-SL]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYSLAERILNA
GATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=813768 QBE57_RS02185 WP_014636430.1 432601..433605(+) (ccpA) [Streptococcus suis strain HBXY-SL]
ATGTTAAACACTGACGATACGGTAACGATTTATGACGTTGCCCGCGAAGCAGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGTTTGGATTATCGTCCAA
ATGCTGTTGCACGTGGCTTGGCCAGCAAGAAGACTACCACTGTGGGGGTTGTGATTCCAAATATTGCTAATGCTTATTTT
GCAACCTTGGCCAAAGGTATCGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTGGTGAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACACCAATTGTTTTAGCTGGTACCGTGGACTTGGAGCACCAATTACCT
AGCGTCAATATTGACTATGCTGCCGCTAGTGTTGATGCAGTCAATCTATTAGCTAAGAACAACAAGAAAATTGCCTTTGT
ATCAGGGCCGCTTGTAGATGACATCAACGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAACGGAATCG
AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAAGGCTACTCTCTAGCAGAACGTATTTTGAATGCT
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTTTATTGAATGGTGTCAGTGATATGGGCGTCAAGGT
TCCAGAAGACTTTGAAATCATTACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCACTATACGATATTGGTGCAATTGCTATGCGTATGCTCACCAAAATCATGCATAAGGAAGAGTTGGAAAACCGTGAG
GTAGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTGA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(9-54)

Periplasmic binding protein-like domain (Peripla_BP_3)

(176-333)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

79.88

99.701

0.796
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.58

99.701

0.793
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.912

99.102

0.584