Detailed information NTG0813705

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: RWU47_RS14920
• Genome accession: NZ_CP136180
• Coordinates: 3148529..3149977 (-)
• Length: 482 a.a.
• NCBI ID: WP_000778202.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ABO21-A020
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3143529..3154977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RWU47_RS14895 (RWU47_14895)	hisD	3144290..3145579 (-)	1290	WP_001253721.1	histidinol dehydrogenase	-
RWU47_RS14900 (RWU47_14900)	hisG	3145685..3146368 (-)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
RWU47_RS14905 (RWU47_14905)	murA	3146368..3147624 (-)	1257	WP_000357156.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
RWU47_RS14910 (RWU47_14910)	ibaG	3147631..3147882 (-)	252	WP_001083680.1	BolA family iron metabolism protein IbaG	-
RWU47_RS14915 (RWU47_14915)	hpf	3148022..3148360 (-)	339	WP_001167461.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
RWU47_RS14920 (RWU47_14920)	rpoN/rpoN1	3148529..3149977 (-)	1449	WP_000778202.1	RNA polymerase factor sigma-54	Machinery gene

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55082.97 Da
• Isoelectric Point: 4.6620

>NTDB_id=813705 RWU47_RS14920 WP_000778202.1 3148529..3149977(-) (rpoN/rpoN1) [Acinetobacter baumannii strain ABO21-A020]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLSTLEHKETDDLTTELNADHLP
DDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKEHILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEII
LAVQHLLSEMDIDEEVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTTGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=813705 RWU47_RS14920 WP_000778202.1 3148529..3149977(-) (rpoN/rpoN1) [Acinetobacter baumannii strain ABO21-A020]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAATTCATTATCGTTAACGCCTCAATTGCAGCAGGCAATCCGTTTACTACA
ACTTTCTAGCCTAGAATTAGAGCAAGAAATCCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTAGAAGATGAAT
CACTAGCAGAAAGTTTATCTACTTTAGAACACAAAGAAACAGATGACCTTACAACAGAGTTGAATGCTGATCACTTACCT
GATGACTTGCCTGTTGATACTGAATGGGATGACATTTATACACATCAATCCACTGCTTTGGGTACTCCTGAGTTCGAAGA
GCGTGAAGATAATCGCCAAGTTCACCTGACGCTTAAAGAACATATTTTGGAGCAAGTGAACTTACTACATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGCATAGTTGATGCTTTAGATGATAAAGGTTTTCTGGATGCTGAATTAGAAGAGATTATT
TTGGCAGTACAGCATTTATTAAGTGAGATGGATATAGACGAGGAAGTGGAAGAGGATGAAGTTTTAGTAGTCTTAAAACA
TATTCAACGTCTTGATCCAATTGGTATCGGAGCTCGTAATTTAGCTGAATGTTTAAAAGTTCAGTTGGAGTTCTTGCCTC
GAGAAACTGAATATTTGAAAGAAGCCAGAAGTCTACTTCAATATTACGAATTACTGATTGCGAATGATCTTAATAAATTA
TTGAAGCAAACAGGGCTTTCCAAAGAACAATTAAAATTTGCAGTTGATTTATTAAAAACATTAAAGCCTTATCCAGGCAT
GGATTTTGAAAAGCAAGAATCAGAGTATCAAATTCCTGACGTAGTCGTTGCCAAGAAGGACTTGCATTGGCAAGTTCAGT
TAAACCCTGATGTGATGCCAAAATTAAGAATCAATTCTTTTTATTCGAGTATGATTCGTAGGGCAGATCAAAGTGATGAT
AATTTATACCTACGTAATCAAATGCTTGAGGCTAAAAATTTTATAAAAAGTATTGATGAACGGCACAAAACATTATTAAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCCGAAGCAATGAAACCTTTAGTACTAAGGG
ATGTTGCAGAAGAAGTAGAATTACATGAGTCGACCGTTTCTCGCGTTACAACAAATAAGTATATGCTTACTCCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCATGTGGGGACAACCACAGGAGGTGAGGCTTCTTCTACCGCAATTCGGGC
GATGATTAAAAAGTTAGTTTCTAATGAAAATCCGCGTAAACCTTTGTCTGATAATGCAATTGCTGCTTTATTGAAAGAGG
AGGGAATAGAAGTAGCTAGAAGGACTGTAGCAAAATATAGAGAATCGTTACATATTCCATCGTCATCCGAGAGAAAAGTC
TTGATCTAA

Domains

Predicted by InterProScan.

• Sigma-54 factor, core binding domain (Sigma54_CBD) (111-308)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	43.333	100	0.459