Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RWV42_RS05195 Genome accession   NZ_CP136173
Coordinates   1125506..1126447 (+) Length   313 a.a.
NCBI ID   WP_001159457.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain ABO21-A049     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1120506..1131447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RWV42_RS05185 (RWV42_05185) basA 1120925..1122772 (+) 1848 WP_114189968.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  RWV42_RS05190 (RWV42_05190) basB 1122843..1124873 (-) 2031 WP_114229831.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  RWV42_RS05195 (RWV42_05195) ceuB 1125506..1126447 (+) 942 WP_001159457.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  RWV42_RS05200 (RWV42_05200) bauC 1126447..1127394 (+) 948 WP_004739506.1 ferric acinetobactin ABC transporter permease subunit BauC -
  RWV42_RS05205 (RWV42_05205) bauE 1127391..1128161 (+) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  RWV42_RS05210 (RWV42_05210) bauB 1128168..1129136 (+) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33979.03 Da        Isoelectric Point: 8.4665

>NTDB_id=813459 RWV42_RS05195 WP_001159457.1 1125506..1126447(+) (ceuB) [Acinetobacter baumannii strain ABO21-A049]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=813459 RWV42_RS05195 WP_001159457.1 1125506..1126447(+) (ceuB) [Acinetobacter baumannii strain ABO21-A049]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTGATTACCATTGTACTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TTCCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTGATTGGTATGGGGGAAGAGATGGCTTCTAGCTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGTCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGCCGCTCGATTATTTACCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419