Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RWU60_RS05300 Genome accession   NZ_CP136172
Coordinates   1131360..1132301 (+) Length   313 a.a.
NCBI ID   WP_001210792.1    Uniprot ID   A0A077GHT6
Organism   Acinetobacter baumannii strain ABO21-A051     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1126360..1137301
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RWU60_RS05290 (RWU60_05290) basA 1126781..1128628 (+) 1848 WP_317857152.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  RWU60_RS05295 (RWU60_05295) basB 1128699..1130729 (-) 2031 WP_317857351.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  RWU60_RS05300 (RWU60_05300) ceuB 1131360..1132301 (+) 942 WP_001210792.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  RWU60_RS05305 (RWU60_05305) bauC 1132301..1133248 (+) 948 WP_317857153.1 ferric acinetobactin ABC transporter permease subunit BauC -
  RWU60_RS05310 (RWU60_05310) bauE 1133245..1134015 (+) 771 WP_317857154.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  RWU60_RS05315 (RWU60_05315) bauB 1134022..1134990 (+) 969 WP_317857155.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33993.06 Da        Isoelectric Point: 8.6941

>NTDB_id=813383 RWU60_RS05300 WP_001210792.1 1131360..1132301(+) (ceuB) [Acinetobacter baumannii strain ABO21-A051]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=813383 RWU60_RS05300 WP_001210792.1 1131360..1132301(+) (ceuB) [Acinetobacter baumannii strain ABO21-A051]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAGCAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGTCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTGGGACTTA
GTTATGCAGCTATAGCCGCTATTGGTTTAATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGGTTTGCGACATTCTTGGTCGCTCGATTATTTACCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077GHT6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422