Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | KI220_RS14580 | Genome accession | NZ_AP023088 |
| Coordinates | 2913415..2913843 (+) | Length | 142 a.a. |
| NCBI ID | WP_020451590.1 | Uniprot ID | A0A6N2GRD1 |
| Organism | Bacillus paralicheniformis strain RSC-1 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 2908415..2918843
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KI220_RS14550 (RSC1_02944) | - | 2908671..2909279 (+) | 609 | WP_020451585.1 | flavin reductase family protein | - |
| KI220_RS14555 (RSC1_02945) | wrbA | 2909481..2910095 (+) | 615 | WP_026579653.1 | NAD(P)H:quinone oxidoreductase | - |
| KI220_RS14560 (RSC1_02946) | - | 2910406..2910546 (+) | 141 | WP_023857597.1 | hypothetical protein | - |
| KI220_RS14565 (RSC1_02947) | - | 2910539..2911372 (+) | 834 | WP_020451587.1 | prohibitin family protein | - |
| KI220_RS14570 (RSC1_02948) | - | 2911461..2912222 (+) | 762 | WP_025809940.1 | hypothetical protein | - |
| KI220_RS14575 (RSC1_02949) | - | 2912282..2913121 (+) | 840 | WP_026579651.1 | thymidylate synthase | - |
| KI220_RS14580 (RSC1_02950) | nucA/comI | 2913415..2913843 (+) | 429 | WP_020451590.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| KI220_RS14585 (RSC1_02951) | lexA | 2914043..2914666 (-) | 624 | WP_020451591.1 | transcriptional repressor LexA | - |
| KI220_RS14590 (RSC1_02952) | yneA | 2914818..2915129 (+) | 312 | WP_020451592.1 | cell division suppressor protein YneA | - |
| KI220_RS14595 (RSC1_02953) | - | 2915148..2915795 (+) | 648 | WP_020451593.1 | recombinase family protein | - |
| KI220_RS14600 (RSC1_02954) | - | 2915861..2916094 (+) | 234 | WP_020451594.1 | DUF896 domain-containing protein | - |
| KI220_RS14605 (RSC1_02955) | tkt | 2916258..2918261 (+) | 2004 | WP_023857593.1 | transketolase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15420.36 Da Isoelectric Point: 7.8950
>NTDB_id=81309 KI220_RS14580 WP_020451590.1 2913415..2913843(+) (nucA/comI) [Bacillus paralicheniformis strain RSC-1]
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDVLYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSDYADGTRILFIVR
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDVLYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSDYADGTRILFIVR
Nucleotide
Download Length: 429 bp
>NTDB_id=81309 KI220_RS14580 WP_020451590.1 2913415..2913843(+) (nucA/comI) [Bacillus paralicheniformis strain RSC-1]
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTGCTGCTTGGGCTTTCGGGAGGGGCTGCATATTCTCC
TCAGCATGCCGAAGGCGCTGCAAGGTATGATGACGTATTGTATTTTCCGGCATCGCGCTATCCTGAAACCGGTGCTCATA
TAAGCGATGCGATCAAAGCGGGCCATTCAGATGTCTGCACAATTGAAAGATCTGGAGCGGATAAGCGCCGTCAGGAATCA
TTAAAAGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGAGGAAAAGGAGC
GTCGGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGATTACGCTGACG
GGACGAGAATTTTGTTTATCGTTCGATAA
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTGCTGCTTGGGCTTTCGGGAGGGGCTGCATATTCTCC
TCAGCATGCCGAAGGCGCTGCAAGGTATGATGACGTATTGTATTTTCCGGCATCGCGCTATCCTGAAACCGGTGCTCATA
TAAGCGATGCGATCAAAGCGGGCCATTCAGATGTCTGCACAATTGAAAGATCTGGAGCGGATAAGCGCCGTCAGGAATCA
TTAAAAGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGAGGAAAAGGAGC
GTCGGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGATTACGCTGACG
GGACGAGAATTTTGTTTATCGTTCGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
59.524 |
88.732 |
0.528 |