Detailed information NTG0081307

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MY015_RS22715
• Genome accession: NZ_AP026907
• Coordinates: 4691308..4692333 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MY732
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4686308..4697333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MY015_RS22705 (MY016_43820)	rpmE	4688539..4688751 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MY015_RS22710 (MY016_43830)	priA	4688954..4691152 (+)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
MY015_RS22715 (MY016_43840)	cytR	4691308..4692333 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MY015_RS22720 (MY016_43850)	ftsN	4692425..4693384 (+)	960	WP_000068834.1	cell division protein FtsN	-
MY015_RS22725 (MY016_43860)	hslV	4693477..4694007 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MY015_RS22730 (MY016_43870)	hslU	4694017..4695348 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
MY015_RS22735 (MY016_43880)	menA	4695415..4696341 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MY015_RS22740 (MY016_43890)	rraA	4696434..4696919 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MY015_RS22745 (MY016_43900)	zapB	4697004..4697249 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=81307 MY015_RS22715 WP_000644904.1 4691308..4692333(+) (cytR) [Escherichia coli strain MY732]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=81307 MY015_RS22715 WP_000644904.1 4691308..4692333(+) (cytR) [Escherichia coli strain MY732]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628