Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   MTS31_RS03740 Genome accession   NZ_CP121563
Coordinates   769795..770949 (-) Length   384 a.a.
NCBI ID   WP_029424585.1    Uniprot ID   A0A2G8V6K8
Organism   Acinetobacter baumannii strain RAB94     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 764795..775949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTS31_RS03720 (MTS31_03720) - 765956..766606 (+) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  MTS31_RS03725 (MTS31_03725) - 766712..767632 (+) 921 WP_086221561.1 DMT family transporter -
  MTS31_RS03730 (MTS31_03730) - 768024..768593 (-) 570 WP_000633612.1 Sua5/YciO/YrdC/YwlC family protein -
  MTS31_RS03735 (MTS31_03735) dprA 768644..769774 (-) 1131 WP_002013158.1 DNA-processing protein DprA Machinery gene
  MTS31_RS03740 (MTS31_03740) tsaP 769795..770949 (-) 1155 WP_029424585.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  MTS31_RS03745 (MTS31_03745) def 771072..771602 (+) 531 WP_001196539.1 peptide deformylase -
  MTS31_RS03750 (MTS31_03750) - 771639..772067 (+) 429 WP_000231981.1 DUF2946 family protein -
  MTS31_RS03755 (MTS31_03755) - 772140..774254 (+) 2115 WP_029424584.1 TonB-dependent copper receptor -
  MTS31_RS03760 (MTS31_03760) - 774308..774514 (+) 207 WP_000182542.1 hypothetical protein -
  MTS31_RS03765 (MTS31_03765) - 774584..775798 (-) 1215 WP_029424583.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42422.39 Da        Isoelectric Point: 8.5909

>NTDB_id=813002 MTS31_RS03740 WP_029424585.1 769795..770949(-) (tsaP) [Acinetobacter baumannii strain RAB94]
MKKVFDGMVNFHALGIKKHLLALALCTGVVIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRRLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAFVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=813002 MTS31_RS03740 WP_029424585.1 769795..770949(-) (tsaP) [Acinetobacter baumannii strain RAB94]
ATGAAAAAGGTTTTTGACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCTTTGGCGCTCTGTAC
AGGTGTCGTAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTGAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCGTTTAGTCGGTAAAGATGAGGGGGATGGCTGTGTCGGTATTATCCGTCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGTTACTACAAGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAGCAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGCTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACCCAAGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTGATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTTTGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2G8V6K8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.438

100

0.984