Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KI220_RS10900 Genome accession   NZ_AP023088
Coordinates   2206727..2206912 (+) Length   61 a.a.
NCBI ID   WP_011197761.1    Uniprot ID   A0A6I7TNH1
Organism   Bacillus paralicheniformis strain RSC-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2201727..2211912
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI220_RS10870 (RSC1_02170) - 2202619..2203431 (-) 813 WP_065643386.1 undecaprenyl-diphosphate phosphatase -
  KI220_RS10875 (RSC1_02171) - 2203613..2203792 (+) 180 WP_003180573.1 YjzC family protein -
  KI220_RS10880 (RSC1_02172) - 2203856..2204050 (-) 195 WP_009328851.1 YjzD family protein -
  KI220_RS10885 (RSC1_02173) - 2204282..2205016 (+) 735 WP_025811652.1 hypothetical protein -
  KI220_RS10890 (RSC1_02174) - 2205102..2205677 (+) 576 WP_003180580.1 hypothetical protein -
  KI220_RS10895 (RSC1_02175) med 2205763..2206716 (+) 954 WP_020450927.1 BMP family ABC transporter substrate-binding protein Regulator
  KI220_RS10900 (RSC1_02176) comZ 2206727..2206912 (+) 186 WP_011197761.1 ComZ family protein Regulator
  KI220_RS10905 (RSC1_02177) - 2206965..2207207 (-) 243 WP_003180586.1 hypothetical protein -
  KI220_RS10910 (RSC1_02178) - 2207376..2208314 (+) 939 WP_003180588.1 beta-ketoacyl-ACP synthase III -
  KI220_RS10915 (RSC1_02179) fabF 2208336..2209574 (+) 1239 WP_003180590.1 beta-ketoacyl-ACP synthase II -
  KI220_RS21645 (RSC1_02180) - 2209849..2210442 (+) 594 WP_229118231.1 hypothetical protein -
  KI220_RS10925 (RSC1_02181) - 2210651..2211439 (+) 789 WP_025808298.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 6842.96 Da        Isoelectric Point: 4.2564

>NTDB_id=81294 KI220_RS10900 WP_011197761.1 2206727..2206912(+) (comZ) [Bacillus paralicheniformis strain RSC-1]
MHEKSMEFLQIAMKYVPEAKAEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKAEAGSDA

Nucleotide


Download         Length: 186 bp        

>NTDB_id=81294 KI220_RS10900 WP_011197761.1 2206727..2206912(+) (comZ) [Bacillus paralicheniformis strain RSC-1]
ATGCACGAAAAATCAATGGAATTTTTGCAAATTGCCATGAAATACGTTCCTGAAGCGAAAGCAGAGATGGAGAAAGCGGG
AATCGAACTTTCCCCGGAAATGCTTGAGCCATTCATGAACTTGTTTACGAAAGTGATGGCCGAGGCTTACGAGCTCGGTA
AAGCGGAAGCCGGTTCAGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TNH1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.333

98.361

0.721

Multiple sequence alignment