Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   F6I35_RS10720 Genome accession   NZ_CP136160
Coordinates   2029756..2029902 (-) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus strain UMB8616     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 2024756..2034902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I35_RS10710 (F6I35_0010705) comE 2027664..2028413 (-) 750 WP_024052478.1 competence system response regulator transcription factor ComE Regulator
  F6I35_RS10715 (F6I35_0010710) comD/comD2 2028413..2029735 (-) 1323 WP_371317911.1 sensor histidine kinase Regulator
  F6I35_RS10720 (F6I35_0010715) comC 2029756..2029902 (-) 147 WP_003029519.1 bacteriocin Regulator
  F6I35_RS10730 (F6I35_0010725) rlmH 2030184..2030663 (-) 480 WP_024052476.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  F6I35_RS10735 (F6I35_0010730) htrA 2030857..2032047 (+) 1191 WP_024052475.1 S1C family serine protease Regulator
  F6I35_RS10740 (F6I35_0010735) spo0J 2032102..2032869 (+) 768 WP_070672281.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=812907 F6I35_RS10720 WP_003029519.1 2029756..2029902(-) (comC) [Streptococcus anginosus strain UMB8616]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=812907 F6I35_RS10720 WP_003029519.1 2029756..2029902(-) (comC) [Streptococcus anginosus strain UMB8616]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396