Detailed information NTG0812788

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QA586_RS02720
• Genome accession: NZ_CP121527
• Coordinates: 530843..531817 (+)
• Length: 324 a.a.
• NCBI ID: WP_278276458.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain 1FSE01
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 525843..536817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA586_RS02685	rpmG	526323..526472 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
QA586_RS02690	-	526655..527206 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QA586_RS02695	-	527207..528667 (+)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QA586_RS02700	-	528651..528851 (+)	201	WP_001831138.1	YqgQ family protein	-
QA586_RS02705	-	528851..529837 (+)	987	WP_001831113.1	ROK family glucokinase	-
QA586_RS02710	-	529837..530163 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QA586_RS02715	-	530163..530786 (+)	624	WP_002446535.1	MBL fold metallo-hydrolase	-
QA586_RS02720	comGA	530843..531817 (+)	975	WP_278276458.1	competence type IV pilus ATPase ComGA	Machinery gene
QA586_RS02725	comGB	531789..532856 (+)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
QA586_RS02730	comGC	532874..533191 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QA586_RS02735	comGD	533181..533618 (+)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QA586_RS02740	-	533605..533898 (+)	294	WP_001831116.1	hypothetical protein	-
QA586_RS02745	-	533822..534313 (+)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
QA586_RS02750	-	534478..534990 (+)	513	WP_002485736.1	shikimate kinase	-
QA586_RS02755	gcvT	535208..536299 (+)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37342.49 Da
• Isoelectric Point: 8.8174

>NTDB_id=812788 QA586_RS02720 WP_278276458.1 530843..531817(+) (comGA) [Staphylococcus epidermidis strain 1FSE01]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELIIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=812788 QA586_RS02720 WP_278276458.1 530843..531817(+) (comGA) [Staphylococcus epidermidis strain 1FSE01]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCATAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701