Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   QA624_RS11180 Genome accession   NZ_CP121526
Coordinates   1992881..1993777 (-) Length   298 a.a.
NCBI ID   WP_278275556.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain 1FSE05     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1987881..1998777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QA624_RS11165 - 1989313..1989903 (-) 591 WP_002456715.1 DUF4064 domain-containing protein -
  QA624_RS11170 - 1990007..1992019 (-) 2013 WP_002470142.1 ABC transporter permease -
  QA624_RS11175 - 1992021..1992770 (-) 750 WP_002456717.1 ABC transporter ATP-binding protein -
  QA624_RS11180 braS 1992881..1993777 (-) 897 WP_278275556.1 sensor histidine kinase Regulator
  QA624_RS11185 braR 1993783..1994448 (-) 666 WP_001830679.1 response regulator transcription factor Regulator
  QA624_RS11190 - 1994479..1994658 (-) 180 WP_002456719.1 hypothetical protein -
  QA624_RS11195 - 1994955..1996424 (+) 1470 WP_002456720.1 alkaline phosphatase -
  QA624_RS11200 - 1996547..1998091 (-) 1545 WP_002456721.1 NAD(P)H-binding protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34897.53 Da        Isoelectric Point: 6.8361

>NTDB_id=812771 QA624_RS11180 WP_278275556.1 1992881..1993777(-) (braS) [Staphylococcus epidermidis strain 1FSE05]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLSFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENLVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDAQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNHGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=812771 QA624_RS11180 WP_278275556.1 1992881..1993777(-) (braS) [Staphylococcus epidermidis strain 1FSE05]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTGTTTTCTTTACCTTTTGATGCATACGTACTAGCAATCAGTATAATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAGTTTTAAAAAGAATGAACATCTTAAAGATAAAGTAGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAACGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATTTAGTTAATCGTGTTCGACAAGAAATTGTGCACATTGATAATTATA
CAAGTCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
TATTTTAACCGATGCACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATTTGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACTGGTATAGGTCTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAGTTGAATCATGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60

98.993

0.594