Detailed information NTG0812659

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QA605_RS06825
• Genome accession: NZ_CP121513
• Coordinates: 1425223..1426197 (+)
• Length: 324 a.a.
• NCBI ID: WP_024051204.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain 20DL
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1420223..1431197

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA605_RS06790	rpmG	1420704..1420853 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
QA605_RS06795	-	1421036..1421587 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QA605_RS06800	-	1421588..1423048 (+)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QA605_RS06805	-	1423032..1423232 (+)	201	WP_001831138.1	YqgQ family protein	-
QA605_RS06810	-	1423232..1424218 (+)	987	WP_001831113.1	ROK family glucokinase	-
QA605_RS06815	-	1424218..1424544 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QA605_RS06820	-	1424544..1425167 (+)	624	WP_002446535.1	MBL fold metallo-hydrolase	-
QA605_RS06825	comGA	1425223..1426197 (+)	975	WP_024051204.1	competence type IV pilus ATPase ComGA	Machinery gene
QA605_RS06830	comGB	1426169..1427236 (+)	1068	WP_024051203.1	competence type IV pilus assembly protein ComGB	Machinery gene
QA605_RS06835	comGC	1427254..1427571 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QA605_RS06840	comGD	1427561..1427998 (+)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QA605_RS06845	-	1427985..1428278 (+)	294	WP_099797718.1	hypothetical protein	-
QA605_RS06850	-	1428202..1428693 (+)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
QA605_RS06855	-	1428858..1429370 (+)	513	WP_002497929.1	shikimate kinase	-
QA605_RS06860	gcvT	1429588..1430679 (+)	1092	WP_099797720.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37329.45 Da
• Isoelectric Point: 8.9899

>NTDB_id=812659 QA605_RS06825 WP_024051204.1 1425223..1426197(+) (comGA) [Staphylococcus epidermidis strain 20DL]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCNPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=812659 QA605_RS06825 WP_024051204.1 1425223..1426197(+) (comGA) [Staphylococcus epidermidis strain 20DL]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTAATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	69.753	100	0.698
comGA	Staphylococcus aureus N315	69.753	100	0.698