Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RS960_RS09310 Genome accession   NZ_CP135966
Coordinates   1891837..1892655 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain ST5477     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1886837..1897655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RS960_RS09290 (RS960_09290) - 1887930..1888907 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  RS960_RS09295 (RS960_09295) - 1889204..1890004 (-) 801 WP_262538485.1 hypothetical protein -
  RS960_RS09300 (RS960_09300) - 1890013..1891530 (-) 1518 WP_317528641.1 ABC transporter ATP-binding protein -
  RS960_RS09305 (RS960_09305) - 1891545..1891859 (-) 315 WP_262538483.1 YfhH family protein -
  RS960_RS09310 (RS960_09310) recX 1891837..1892655 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  RS960_RS09315 (RS960_09315) sgtB 1892916..1893725 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  RS960_RS09320 (RS960_09320) - 1894065..1894580 (-) 516 WP_188349423.1 type 1 glutamine amidotransferase domain-containing protein -
  RS960_RS09325 (RS960_09325) - 1894710..1894871 (-) 162 WP_001005407.1 SE1561 family protein -
  RS960_RS09330 (RS960_09330) yfkAB 1895095..1896246 (+) 1152 WP_001089617.1 radical SAM/CxCxxxxC motif protein YfkAB -
  RS960_RS09335 (RS960_09335) - 1896506..1897036 (-) 531 WP_000184381.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=812601 RS960_RS09310 WP_001124422.1 1891837..1892655(-) (recX) [Staphylococcus aureus strain ST5477]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=812601 RS960_RS09310 WP_001124422.1 1891837..1892655(-) (recX) [Staphylococcus aureus strain ST5477]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGATATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996