Detailed information NTG0812523

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QA611_RS06855
• Genome accession: NZ_CP121497
• Coordinates: 1421584..1422558 (+)
• Length: 324 a.a.
• NCBI ID: WP_151368235.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain 24FSE04
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1416584..1427558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA611_RS06820	rpmG	1417064..1417213 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
QA611_RS06825	-	1417396..1417947 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QA611_RS06830	-	1417948..1419408 (+)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QA611_RS06835	-	1419392..1419592 (+)	201	WP_001831138.1	YqgQ family protein	-
QA611_RS06840	-	1419592..1420578 (+)	987	WP_001831113.1	ROK family glucokinase	-
QA611_RS06845	-	1420578..1420904 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QA611_RS06850	-	1420904..1421527 (+)	624	WP_278269668.1	MBL fold metallo-hydrolase	-
QA611_RS06855	comGA	1421584..1422558 (+)	975	WP_151368235.1	competence type IV pilus ATPase ComGA	Machinery gene
QA611_RS06860	comGB	1422530..1423597 (+)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
QA611_RS06865	comGC	1423615..1423932 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QA611_RS06870	comGD	1423922..1424359 (+)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QA611_RS06875	-	1424346..1424639 (+)	294	WP_001831116.1	hypothetical protein	-
QA611_RS06880	-	1424563..1425054 (+)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
QA611_RS06885	-	1425219..1425731 (+)	513	WP_002440040.1	shikimate kinase	-
QA611_RS06890	gcvT	1425949..1427040 (+)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37356.47 Da
• Isoelectric Point: 8.8079

>NTDB_id=812523 QA611_RS06855 WP_151368235.1 1421584..1422558(+) (comGA) [Staphylococcus epidermidis strain 24FSE04]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGYLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=812523 QA611_RS06855 WP_151368235.1 1421584..1422558(+) (comGA) [Staphylococcus epidermidis strain 24FSE04]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGTATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	69.753	100	0.698
comGA	Staphylococcus aureus N315	69.753	100	0.698