Detailed information NTG0812412

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QA589_RS02240
• Genome accession: NZ_CP121480
• Coordinates: 441538..442512 (+)
• Length: 324 a.a.
• NCBI ID: WP_024051204.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain 47FSE01
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 436538..447512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA589_RS02205	rpmG	437019..437168 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
QA589_RS02210	-	437351..437902 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QA589_RS02215	-	437903..439363 (+)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QA589_RS02220	-	439347..439547 (+)	201	WP_001831138.1	YqgQ family protein	-
QA589_RS02225	-	439547..440533 (+)	987	WP_001831113.1	ROK family glucokinase	-
QA589_RS02230	-	440533..440859 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QA589_RS02235	-	440859..441482 (+)	624	WP_002446535.1	MBL fold metallo-hydrolase	-
QA589_RS02240	comGA	441538..442512 (+)	975	WP_024051204.1	competence type IV pilus ATPase ComGA	Machinery gene
QA589_RS02245	comGB	442484..443551 (+)	1068	WP_024051203.1	competence type IV pilus assembly protein ComGB	Machinery gene
QA589_RS02250	comGC	443569..443886 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QA589_RS02255	comGD	443876..444313 (+)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QA589_RS02260	-	444300..444593 (+)	294	WP_099797718.1	hypothetical protein	-
QA589_RS02265	-	444517..445008 (+)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
QA589_RS02270	-	445173..445685 (+)	513	WP_002497929.1	shikimate kinase	-
QA589_RS02275	gcvT	445903..446994 (+)	1092	WP_099797720.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37329.45 Da
• Isoelectric Point: 8.9899

>NTDB_id=812412 QA589_RS02240 WP_024051204.1 441538..442512(+) (comGA) [Staphylococcus epidermidis strain 47FSE01]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCNPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=812412 QA589_RS02240 WP_024051204.1 441538..442512(+) (comGA) [Staphylococcus epidermidis strain 47FSE01]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTAATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	69.753	100	0.698
comGA	Staphylococcus aureus N315	69.753	100	0.698