Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   P8P68_RS09375 Genome accession   NZ_CP121467
Coordinates   1943001..1943294 (+) Length   97 a.a.
NCBI ID   WP_000797739.1    Uniprot ID   A0A1X1HBS2
Organism   Streptococcus sp. D7B5     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1938001..1948294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8P68_RS09360 (P8P68_09360) - 1941785..1941955 (+) 171 Protein_1795 type I restriction-modification system subunit M -
  P8P68_RS09365 (P8P68_09365) - 1942059..1942463 (+) 405 WP_278275933.1 YbgA family protein -
  P8P68_RS09370 (P8P68_09370) - 1942447..1942812 (+) 366 WP_001241800.1 TIGR02328 family protein -
  P8P68_RS09375 (P8P68_09375) HI0659 1943001..1943294 (+) 294 WP_000797739.1 helix-turn-helix transcriptional regulator Machinery gene
  P8P68_RS09380 (P8P68_09380) metE 1943647..1945896 (+) 2250 WP_278275934.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  P8P68_RS09385 (P8P68_09385) metF 1945967..1946833 (+) 867 WP_042903098.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10766.40 Da        Isoelectric Point: 4.9062

>NTDB_id=812267 P8P68_RS09375 WP_000797739.1 1943001..1943294(+) (HI0659) [Streptococcus sp. D7B5]
MKNSAIGSNWKDIRSELFTKEEILESDMRVDIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKG

Nucleotide


Download         Length: 294 bp        

>NTDB_id=812267 P8P68_RS09375 WP_000797739.1 1943001..1943294(+) (HI0659) [Streptococcus sp. D7B5]
ATGAAGAATAGTGCTATTGGAAGTAATTGGAAGGATATCCGATCTGAACTCTTTACCAAGGAGGAAATCCTTGAAAGTGA
TATGCGAGTGGATATCATGAGTGAGTTGATTGAGGCTAGACATGAGCAAGGTATCAGTCAGAAAAAGCTAGAGGAACTCA
GTGGAGTAAGCCAGCCTGTTATAGCTAGGATGGAGACAGGAAAGACCAGTCCTCAGTTGGATACGGTCTTAAAAGTTTTA
GCAAGTTTAGGAAAGACACTAGCAGTCGTTCCACTTGAACAGGAAAAAGGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1HBS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

58.242

93.814

0.546