Detailed information NTG0081226

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OQH85_RS21765
• Genome accession: NZ_AP026902
• Coordinates: 4509035..4510060 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain MY504
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4504035..4515060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OQH85_RS21745 (MY017_41840)	metJ	4505220..4505537 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
OQH85_RS21750 (MY017_41850)	yiiX	4505597..4506205 (+)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
OQH85_RS21755 (MY017_41860)	rpmE	4506266..4506478 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
OQH85_RS21760 (MY017_41870)	priA	4506681..4508879 (+)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
OQH85_RS21765 (MY017_41880)	cytR	4509035..4510060 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
OQH85_RS21770 (MY017_41890)	ftsN	4510152..4511111 (+)	960	WP_000068847.1	cell division protein FtsN	-
OQH85_RS21775 (MY017_41900)	hslV	4511204..4511734 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
OQH85_RS21780 (MY017_41910)	hslU	4511744..4513075 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
OQH85_RS21785 (MY017_41920)	menA	4513142..4514068 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OQH85_RS21790 (MY017_41930)	rraA	4514161..4514646 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
OQH85_RS21795 (MY017_41940)	zapB	4514731..4514976 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=81226 OQH85_RS21765 WP_000644911.1 4509035..4510060(+) (cytR) [Escherichia coli strain MY504]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=81226 OQH85_RS21765 WP_000644911.1 4509035..4510060(+) (cytR) [Escherichia coli strain MY504]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625