Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   P9972_RS01775 Genome accession   NZ_CP121465
Coordinates   338348..338512 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain YA215     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 333348..343512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P9972_RS01770 (P9972_01770) srfAB 335239..338331 (+) 3093 Protein_308 surfactin non-ribosomal peptide synthetase SrfAB -
  P9972_RS01775 (P9972_01775) comS 338348..338512 (+) 165 WP_269195014.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=812127 P9972_RS01775 WP_269195014.1 338348..338512(+) (comS) [Bacillus velezensis strain YA215]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=812127 P9972_RS01775 WP_269195014.1 338348..338512(+) (comS) [Bacillus velezensis strain YA215]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5