Detailed information NTG0812108

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: P9875_RS05615
• Genome accession: NZ_CP121464
• Coordinates: 1232658..1233716 (-)
• Length: 352 a.a.
• NCBI ID: WP_035824796.1
• Uniprot ID: -
• Organism: Janthinobacterium rivuli strain DEMB2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1227658..1238716

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P9875_RS05585 (P9875_05585)	-	1228381..1228728 (+)	348	WP_278317792.1	antibiotic biosynthesis monooxygenase	-
P9875_RS05590 (P9875_05590)	-	1228725..1229177 (-)	453	WP_099403268.1	hypothetical protein	-
P9875_RS05595 (P9875_05595)	-	1229355..1229621 (+)	267	WP_046683371.1	hypothetical protein	-
P9875_RS05600 (P9875_05600)	rpoH	1229711..1230610 (-)	900	WP_170840566.1	RNA polymerase sigma factor RpoH	-
P9875_RS05605 (P9875_05605)	ftsX	1230995..1231915 (-)	921	WP_099403267.1	permease-like cell division protein FtsX	-
P9875_RS05610 (P9875_05610)	-	1231912..1232649 (-)	738	WP_225243803.1	ATP-binding cassette domain-containing protein	-
P9875_RS05615 (P9875_05615)	pilA	1232658..1233716 (-)	1059	WP_035824796.1	signal recognition particle-docking protein FtsY	Machinery gene
P9875_RS05620 (P9875_05620)	-	1233881..1234861 (-)	981	WP_278317793.1	MerR family transcriptional regulator	-
P9875_RS05625 (P9875_05625)	-	1235027..1236340 (+)	1314	WP_278317794.1	FAD-dependent oxidoreductase	-
P9875_RS05630 (P9875_05630)	-	1236330..1237127 (+)	798	WP_278317795.1	DUF1365 domain-containing protein	-
P9875_RS05635 (P9875_05635)	-	1237124..1238359 (+)	1236	WP_278317796.1	cyclopropane-fatty-acyl-phospholipid synthase family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37338.64 Da
• Isoelectric Point: 6.8950

>NTDB_id=812108 P9875_RS05615 WP_035824796.1 1232658..1233716(-) (pilA) [Janthinobacterium rivuli strain DEMB2]
MFSFFKKKPIAPEAAPAEPLVLPAATPPAPQPAAAPLSGAPAELVPVIVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGA
KIDDALYEELEAALLMSDAGIDATEFLLTELKKKVKEDKLLDAAAVKAALKVLLIDLLSPLEKRFELGRHKPLVMMISGV
NGAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVVMVD
TAGRLPTQLHLMEELKKIKRVIGKGMEGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIAR
VRPVPVYFIGIGEKIEDLQPFVAAEFVEALLG

Nucleotide

• Length: 1059 bp

>NTDB_id=812108 P9875_RS05615 WP_035824796.1 1232658..1233716(-) (pilA) [Janthinobacterium rivuli strain DEMB2]
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCTGCGCCAGCCGAGCCCCTCGTCCTTCCCGCCGCCACGCC
GCCTGCACCGCAGCCTGCCGCTGCGCCCCTGAGCGGCGCGCCGGCCGAGCTCGTGCCCGTGATCGTGGCCGCCGAACCCG
AGAAAAAATCGTGGATGACGCGCCTGAAGGCGGGCCTGTCGAAAACCTCGAACACCTTGTCCGTGCTGTTCGTCGGCGCG
AAGATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCCTTGCTGATGTCCGACGCGGGCATCGACGCCACGGAATTCCT
GCTCACGGAATTGAAGAAGAAGGTCAAGGAAGACAAGCTGCTCGACGCGGCCGCCGTCAAGGCCGCCCTGAAAGTATTGC
TGATCGACCTGCTCTCGCCGCTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTGGTGATGATGATTTCCGGCGTG
AATGGCGCTGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAACAACCAGTCCGTGCTGCTGGCTGC
GGGCGACACCTTCCGCGCCGCCGCGCGCGAACAACTGATGGTCTGGGGCGAGCGCAACAACGTCACCGTGATTTCGCAGG
AATCGGGCGACCCGGCCGCCGTGGCCTACGATTCCGTGCAATCGGCGAAGGCGCGCGGCATCGACGTGGTGATGGTCGAC
ACAGCGGGCCGTTTGCCGACGCAGTTGCACCTGATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGA
AGGCGCGCCGCATGAAACCCTGCTCGTCATCGACGGCAACACGGGCCAGAACGCCCTCACGCAAGTGAAAGCGTTTGACG
ATGCCCTGCAGTTGAGCGGCCTGGTGATCACCAAGCTGGACGGTACCGCCAAGGGCGGCGTGCTGGCGGCGATTGCCCGC
GTGCGTCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCTTTCGTGGCTGCCGAATTTGT
CGAAGCGCTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (71-131)

• SRP54-type protein, GTPase domain (SRP54) (153-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.707	93.182	0.528