Detailed information NTG0812063

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RS159_RS12495
• Genome accession: NZ_CP135709
• Coordinates: 2542907..2543890 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain TUM1857
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2537907..2548890

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RS159_RS12470 (RS159_12470)	-	2539056..2539163 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RS159_RS12475 (RS159_12475)	-	2539539..2539646 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
RS159_RS12480 (RS159_12480)	-	2540022..2540129 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RS159_RS12485 (RS159_12485)	yhjV	2540605..2541876 (+)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
RS159_RS12490 (RS159_12490)	dppF	2541906..2542910 (-)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RS159_RS12495 (RS159_12495)	amiE	2542907..2543890 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
RS159_RS12500 (RS159_12500)	dppC	2543901..2544803 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RS159_RS12505 (RS159_12505)	dppB	2544813..2545832 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
RS159_RS12510 (RS159_12510)	dppA	2546139..2547746 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=812063 RS159_RS12495 WP_001196477.1 2542907..2543890(-) (amiE) [Escherichia coli strain TUM1857]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=812063 RS159_RS12495 WP_001196477.1 2542907..2543890(-) (amiE) [Escherichia coli strain TUM1857]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404