Detailed information NTG0812045

Bioinformatically predicted

Overview

• Name: tonB2
• Type: Machinery gene
• Locus tag: P9J63_RS15820
• Genome accession: NZ_CP121375
• Coordinates: 3231741..3232625 (-)
• Length: 294 a.a.
• NCBI ID: WP_002125537.1
• Uniprot ID: A0A062IEN6
• Organism: Acinetobacter baumannii strain LRT
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
ICE	3230077..3240022	3231741..3232625	within	0

Gene organization within MGE regions

Location: 3230077..3240022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P9J63_RS15810 (P9J63_15810)	-	3230077..3231165 (+)	1089	WP_000122983.1	PhoH family protein	-
P9J63_RS15815 (P9J63_15815)	ybeY	3231175..3231651 (+)	477	WP_000703571.1	rRNA maturation RNase YbeY	-
P9J63_RS15820 (P9J63_15820)	tonB2	3231741..3232625 (-)	885	WP_002125537.1	energy transducer TonB	Machinery gene
P9J63_RS15825 (P9J63_15825)	-	3232856..3233527 (+)	672	WP_001193961.1	hypothetical protein	-
P9J63_RS15830 (P9J63_15830)	-	3233685..3234398 (+)	714	WP_000201548.1	DUF3108 domain-containing protein	-
P9J63_RS15835 (P9J63_15835)	-	3234471..3235046 (+)	576	WP_000543071.1	xanthine phosphoribosyltransferase	-
P9J63_RS15840 (P9J63_15840)	wrbA	3235099..3235692 (-)	594	WP_001183358.1	NAD(P)H:quinone oxidoreductase	-
P9J63_RS15845 (P9J63_15845)	-	3235980..3237227 (+)	1248	WP_000893466.1	YihY family inner membrane protein	-
P9J63_RS15850 (P9J63_15850)	-	3237248..3238162 (-)	915	WP_004839664.1	DMT family transporter	-
P9J63_RS15855 (P9J63_15855)	-	3238268..3238738 (+)	471	Protein_3093	AraC family ligand binding domain-containing protein	-
P9J63_RS15860 (P9J63_15860)	-	3238789..3240022 (+)	1234	Protein_3094	IS3 family transposase	-

Sequence

Protein

• Length: 294 a.a.
• Molecular weight: 33630.51 Da
• Isoelectric Point: 9.0947

>NTDB_id=812045 P9J63_RS15820 WP_002125537.1 3231741..3232625(-) (tonB2) [Acinetobacter baumannii strain LRT]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIHPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQNFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDVNMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide

• Length: 885 bp

>NTDB_id=812045 P9J63_RS15820 WP_002125537.1 3231741..3232625(-) (tonB2) [Acinetobacter baumannii strain LRT]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCATCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCATCCTACTGAAGATGTAATCAAGCATGCAGACTTTTTAGCTCAAGCCGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGC
CTTGAAGCTCAGTATTTACAACGTCAGCAAAATTTTAGTCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
AAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCATTTGGCCGTTTTGA
TGTAAATATGAAAGATATTTCAGAGCTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

• Gram-negative bacterial TonB protein C-terminal (TonB_C) (207-284)

3D structure

• AlphaFold DB: A0A062IEN6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tonB2	Acinetobacter baumannii D1279779	98.98	100	0.99