Detailed information NTG0811963

Bioinformatically predicted

Overview

• Name: tonB2
• Type: Machinery gene
• Locus tag: P9J59_RS15805
• Genome accession: NZ_CP121365
• Coordinates: 3228687..3229571 (-)
• Length: 294 a.a.
• NCBI ID: WP_002125537.1
• Uniprot ID: A0A062IEN6
• Organism: Acinetobacter baumannii strain Ab_8_4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
ICE	3227023..3236968	3228687..3229571	within	0

Gene organization within MGE regions

Location: 3227023..3236968

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P9J59_RS15795 (P9J59_15795)	-	3227023..3228111 (+)	1089	WP_000122983.1	PhoH family protein	-
P9J59_RS15800 (P9J59_15800)	ybeY	3228121..3228597 (+)	477	WP_000703571.1	rRNA maturation RNase YbeY	-
P9J59_RS15805 (P9J59_15805)	tonB2	3228687..3229571 (-)	885	WP_002125537.1	energy transducer TonB	Machinery gene
P9J59_RS15810 (P9J59_15810)	-	3229802..3230473 (+)	672	WP_001193961.1	hypothetical protein	-
P9J59_RS15815 (P9J59_15815)	-	3230631..3231344 (+)	714	WP_000201548.1	DUF3108 domain-containing protein	-
P9J59_RS15820 (P9J59_15820)	-	3231417..3231992 (+)	576	WP_000543071.1	xanthine phosphoribosyltransferase	-
P9J59_RS15825 (P9J59_15825)	wrbA	3232045..3232638 (-)	594	WP_001183358.1	NAD(P)H:quinone oxidoreductase	-
P9J59_RS15830 (P9J59_15830)	-	3232926..3234173 (+)	1248	WP_000893466.1	YihY family inner membrane protein	-
P9J59_RS15835 (P9J59_15835)	-	3234194..3235108 (-)	915	WP_004839664.1	DMT family transporter	-
P9J59_RS15840 (P9J59_15840)	-	3235214..3235684 (+)	471	Protein_3090	AraC family ligand binding domain-containing protein	-
P9J59_RS15845 (P9J59_15845)	-	3235735..3236968 (+)	1234	Protein_3091	IS3 family transposase	-

Sequence

Protein

• Length: 294 a.a.
• Molecular weight: 33630.51 Da
• Isoelectric Point: 9.0947

>NTDB_id=811963 P9J59_RS15805 WP_002125537.1 3228687..3229571(-) (tonB2) [Acinetobacter baumannii strain Ab_8_4]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIHPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQNFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDVNMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide

• Length: 885 bp

>NTDB_id=811963 P9J59_RS15805 WP_002125537.1 3228687..3229571(-) (tonB2) [Acinetobacter baumannii strain Ab_8_4]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCATCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCATCCTACTGAAGATGTAATCAAGCATGCAGACTTTTTAGCTCAAGCCGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGC
CTTGAAGCTCAGTATTTACAACGTCAGCAAAATTTTAGTCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
AAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCATTTGGCCGTTTTGA
TGTAAATATGAAAGATATTTCAGAGCTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

• Gram-negative bacterial TonB protein C-terminal (TonB_C) (207-284)

3D structure

• AlphaFold DB: A0A062IEN6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tonB2	Acinetobacter baumannii D1279779	98.98	100	0.99