Detailed information NTG0811944

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RS160_RS01050
• Genome accession: NZ_CP135706
• Coordinates: 214482..215465 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain TUM1880
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 209482..220465

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RS160_RS01035 (RS160_01035)	dppA	210625..212232 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
RS160_RS01040 (RS160_01040)	dppB	212540..213559 (+)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
RS160_RS01045 (RS160_01045)	dppC	213569..214471 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RS160_RS01050 (RS160_01050)	amiE	214482..215465 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
RS160_RS01055 (RS160_01055)	dppF	215462..216466 (+)	1005	WP_000107038.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RS160_RS01060 (RS160_01060)	yhjV	216496..217767 (-)	1272	WP_001439239.1	aromatic amino acid transport family protein	-
RS160_RS01065 (RS160_01065)	-	218243..218350 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RS160_RS01070 (RS160_01070)	-	218726..218833 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RS160_RS01075 (RS160_01075)	-	219209..219316 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=811944 RS160_RS01050 WP_001196496.1 214482..215465(+) (amiE) [Escherichia coli strain TUM1880]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=811944 RS160_RS01050 WP_001196496.1 214482..215465(+) (amiE) [Escherichia coli strain TUM1880]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401