Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | OQH85_RS05660 | Genome accession | NZ_AP026902 |
| Coordinates | 1189189..1189704 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130208.1 | Uniprot ID | Q8FEP8 |
| Organism | Escherichia coli strain MY504 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1184189..1194704
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OQH85_RS05615 (MY017_11010) | csrA | 1185044..1185229 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| OQH85_RS05645 (MY017_11020) | yqaB | 1186419..1186985 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| OQH85_RS05650 (MY017_11030) | yqaA | 1186982..1187410 (+) | 429 | WP_001287462.1 | YqaA family protein | - |
| OQH85_RS05655 (MY017_11040) | gshA | 1187483..1189039 (+) | 1557 | WP_001539417.1 | glutamate--cysteine ligase | - |
| OQH85_RS05660 (MY017_11050) | luxS | 1189189..1189704 (+) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | Regulator |
| OQH85_RS05665 | tnpA | 1189841..1190299 (-) | 459 | WP_000526113.1 | IS200/IS605-like element IS200C family transposase | - |
| OQH85_RS05670 (MY017_11070) | emrB | 1190479..1192017 (-) | 1539 | WP_001539415.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| OQH85_RS05675 (MY017_11080) | emrA | 1192034..1193206 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| OQH85_RS05680 (MY017_11090) | emrR | 1193333..1193863 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| OQH85_RS05685 (MY017_11100) | ygaH | 1193954..1194289 (-) | 336 | WP_000119749.1 | L-valine transporter subunit YgaH | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19443.21 Da Isoelectric Point: 5.0362
>NTDB_id=81179 OQH85_RS05660 WP_001130208.1 1189189..1189704(+) (luxS) [Escherichia coli strain MY504]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=81179 OQH85_RS05660 WP_001130208.1 1189189..1189704(+) (luxS) [Escherichia coli strain MY504]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCAAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCAAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |