Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   OCUAC_RS14915 Genome accession   NZ_AP023077
Coordinates   3115138..3115548 (-) Length   136 a.a.
NCBI ID   WP_002067305.1    Uniprot ID   A0A333UQE7
Organism   Acinetobacter baumannii strain OCU_Ac16a     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3110138..3120548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCUAC_RS14885 - 3110224..3110493 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  OCUAC_RS14890 rapZ 3110490..3111341 (-) 852 WP_000821671.1 RNase adapter RapZ -
  OCUAC_RS14895 panC 3111364..3112212 (-) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  OCUAC_RS14900 panB 3112216..3113025 (-) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  OCUAC_RS14905 folK 3113071..3113553 (-) 483 WP_000219215.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  OCUAC_RS14910 pcnB 3113550..3115013 (-) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  OCUAC_RS14915 comEA 3115138..3115548 (-) 411 WP_002067305.1 ComEA family DNA-binding protein Machinery gene
  OCUAC_RS14920 mazG 3115517..3116323 (-) 807 WP_057066304.1 nucleoside triphosphate pyrophosphohydrolase -
  OCUAC_RS14925 - 3116435..3117208 (+) 774 WP_058062372.1 SDR family oxidoreductase -
  OCUAC_RS14930 - 3117253..3119559 (-) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15668.96 Da        Isoelectric Point: 10.4475

>NTDB_id=81179 OCUAC_RS14915 WP_002067305.1 3115138..3115548(-) (comEA) [Acinetobacter baumannii strain OCU_Ac16a]
MQYSMRFWKNKYFLLIILCLGVISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=81179 OCUAC_RS14915 WP_002067305.1 3115138..3115548(-) (comEA) [Acinetobacter baumannii strain OCU_Ac16a]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTCTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A333UQE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

96.324

100

0.963
  comEA Acinetobacter baumannii D1279779

95.588

100

0.956
  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412

Multiple sequence alignment