Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   P3S51_RS10845 Genome accession   NZ_CP121303
Coordinates   2193609..2194487 (-) Length   292 a.a.
NCBI ID   WP_154773377.1    Uniprot ID   -
Organism   Acinetobacter sp. ANC 7201     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2188609..2199487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3S51_RS10830 (P3S51_10830) miaB 2190429..2191883 (+) 1455 WP_248103214.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  P3S51_RS10835 (P3S51_10835) - 2191921..2192994 (+) 1074 WP_154773379.1 PhoH family protein -
  P3S51_RS10840 (P3S51_10840) ybeY 2193020..2193502 (+) 483 WP_154773378.1 rRNA maturation RNase YbeY -
  P3S51_RS10845 (P3S51_10845) tonB2 2193609..2194487 (-) 879 WP_154773377.1 energy transducer TonB Machinery gene
  P3S51_RS10850 (P3S51_10850) - 2194716..2195390 (+) 675 WP_154773376.1 hypothetical protein -
  P3S51_RS10855 (P3S51_10855) - 2195541..2196254 (+) 714 WP_248103212.1 DUF3108 domain-containing protein -
  P3S51_RS10860 (P3S51_10860) - 2196343..2196918 (+) 576 WP_171501335.1 xanthine phosphoribosyltransferase -
  P3S51_RS10865 (P3S51_10865) - 2197047..2197403 (+) 357 WP_248103210.1 hypothetical protein -
  P3S51_RS10870 (P3S51_10870) wrbA 2197423..2198016 (-) 594 WP_154773373.1 NAD(P)H:quinone oxidoreductase -
  P3S51_RS10875 (P3S51_10875) - 2198131..2199378 (+) 1248 WP_154773372.1 YihY family inner membrane protein -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33190.90 Da        Isoelectric Point: 9.4308

>NTDB_id=811753 P3S51_RS10845 WP_154773377.1 2193609..2194487(-) (tonB2) [Acinetobacter sp. ANC 7201]
MSIKIFLTPFRSHWWQDSIFTASLLIAGFLHLIVLTLQFAEPTATDTSTKDIAVSIRPAEKEVKNADFLAQENQQGAGTF
REAHRISSDMPAAMEDLSAGEQQLKSLEQMQQQRELSFEEKVLMTTLSWKKEAEQNNRKKAMEQLNSQFQAKAAMVASIE
AQYLKRQQNFSRTQKVKTLDGIQAKKDVSAAYMDKFREKVEFYGNRYYPEQAKQMRLSGEVRLMVILNANGGIRAIRLID
SSGHAILDEAAKASVRKAAPYGAFDSKMKDISELRIIRTWRFDPAEAEIEVN

Nucleotide


Download         Length: 879 bp        

>NTDB_id=811753 P3S51_RS10845 WP_154773377.1 2193609..2194487(-) (tonB2) [Acinetobacter sp. ANC 7201]
ATGTCAATTAAAATATTTTTAACACCTTTTAGAAGCCACTGGTGGCAAGATTCTATTTTTACTGCATCATTGTTGATTGC
AGGATTTTTGCATCTCATTGTTTTGACTCTACAATTTGCAGAGCCAACAGCAACTGACACATCGACAAAAGATATTGCAG
TTTCTATTCGACCTGCTGAAAAAGAAGTAAAAAATGCAGATTTTTTAGCACAAGAAAATCAACAAGGGGCGGGGACATTT
CGTGAAGCACATCGGATATCAAGCGATATGCCTGCTGCGATGGAAGATTTAAGCGCTGGTGAACAACAACTTAAAAGTTT
AGAGCAAATGCAACAACAACGTGAATTGAGCTTTGAAGAAAAAGTGTTAATGACCACGTTAAGTTGGAAAAAAGAAGCAG
AGCAAAATAACCGTAAAAAGGCGATGGAACAACTCAATAGCCAATTTCAAGCCAAAGCAGCAATGGTTGCAAGCATTGAA
GCACAATATTTAAAACGTCAGCAAAATTTCAGTCGTACTCAAAAAGTAAAAACTTTAGATGGCATTCAGGCGAAAAAAGA
CGTTTCAGCAGCGTATATGGATAAATTCCGTGAAAAAGTAGAATTTTACGGTAATCGATATTATCCAGAACAAGCTAAAC
AAATGCGTTTATCTGGTGAAGTTCGCTTAATGGTTATCTTAAATGCGAATGGCGGTATTCGTGCAATTCGTTTAATTGAT
AGTTCAGGTCATGCCATTTTAGATGAGGCAGCTAAAGCCTCGGTTCGTAAAGCAGCACCGTATGGTGCATTCGATTCTAA
AATGAAAGATATCTCAGAGCTTCGAATTATTCGTACTTGGCGTTTTGATCCTGCTGAAGCTGAAATTGAAGTGAACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

70.732

98.288

0.695